DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15696 and msx2b

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_571351.3 Gene:msx2b / 30531 ZFINID:ZDB-GENE-980526-492 Length:241 Species:Danio rerio


Alignment Length:140 Identity:49/140 - (35%)
Similarity:66/140 - (47%) Gaps:22/140 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 SGGSP-----PASAAEAQIPVYD----WLQYTRYHPPKLPRALRQNAPA---KRTPGRLPRIPFT 102
            |.|.|     ..|..:::.|..|    |:..:||      ...||.:|.   |....|.||.|||
Zfish    65 SAGIPKHFMLQTSPVKSESPEPDDCTSWVMNSRY------SQTRQESPCPLRKHKTNRKPRTPFT 123

  Fly   103 PQQLQALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQNRRARERREKREKDESCDST---- 163
            ..||.|||..:::..|||..:..:.:.||.||.|:||||||||||:.:|.:..:.|....|    
Zfish   124 TSQLLALERKFRQKQYLSIAERAEFSSSLTLTETQVKIWFQNRRAKAKRLQEAELEKLKLTAKPA 188

  Fly   164 FSSNASSPEP 173
            ...|.|.|.|
Zfish   189 LHPNFSLPLP 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 24/48 (50%)
msx2bNP_571351.3 Homeodomain 116..172 CDD:459649 29/55 (53%)

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