DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15696 and hoxd4a

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001119917.1 Gene:hoxd4a / 30329 ZFINID:ZDB-GENE-980526-214 Length:256 Species:Danio rerio


Alignment Length:145 Identity:40/145 - (27%)
Similarity:61/145 - (42%) Gaps:40/145 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PASYVS-KESGGSPPASAAEAQIP------VYDWLQ----------YTRYHPPKLPRALRQNAPA 89
            ||..:| ..:||....:..:..||      ||.|::          ||...|             
Zfish   115 PAVQISGSRTGGQQQNTKTQNGIPTKQPAVVYPWMKKVHVTTVNPDYTGPEP------------- 166

  Fly    90 KRTPGRLPRIPFTPQQLQALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQNRRARERREKR 154
            ||:     |..:|.||:..||..:..:.||:.....::|.:|.|:..::||||||||.     |.
Zfish   167 KRS-----RTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRM-----KW 221

  Fly   155 EKDESCDSTFSSNAS 169
            :||....:|...:||
Zfish   222 KKDHKLPNTKGRSAS 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 15/48 (31%)
hoxd4aNP_001119917.1 Homeodomain 167..223 CDD:459649 22/65 (34%)

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