DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15696 and Msx1

DIOPT Version :9

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_034965.2 Gene:Msx1 / 17701 MGIID:97168 Length:303 Species:Mus musculus


Alignment Length:175 Identity:59/175 - (33%)
Similarity:81/175 - (46%) Gaps:33/175 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FSIEYILNRAGDRYVGTNASLGV----LQRLRASLPFHPYAHPASYVSKESGGSP---------- 54
            ||:|.::  |..|..|...|:.|    .|....|:. |....|.|..:.::..||          
Mouse    61 FSVEALM--ADHRKPGAKESVLVASEGAQAAGGSVQ-HLGTRPGSLGAPDAPSSPRPLGHFSVGG 122

  Fly    55 ----PASA-AEAQIPV----YDWLQYTRYHPPKLPRALRQNAPA----KRTPGRLPRIPFTPQQL 106
                |..| .:|:.|.    ..|:|..|:.||.   |.|.:.||    |....|.||.|||..||
Mouse   123 LLKLPEDALVKAESPEKLDRTPWMQSPRFSPPP---ARRLSPPACTLRKHKTNRKPRTPFTTAQL 184

  Fly   107 QALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQNRRARERR 151
            .|||..:::..|||..:..:.:.||.||.|:||||||||||:.:|
Mouse   185 LALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeobox 97..144 CDD:278475 23/46 (50%)
Msx1NP_034965.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..53
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..112 4/22 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 135..163 8/30 (27%)
Homeobox 175..228 CDD:278475 28/52 (54%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000776
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.770

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