DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15696 and nob-1

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001369824.1 Gene:nob-1 / 176641 WormBaseID:WBGene00003779 Length:243 Species:Caenorhabditis elegans


Alignment Length:161 Identity:36/161 - (22%)
Similarity:61/161 - (37%) Gaps:43/161 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ASLPFHPYAHPASYVSKESGGSPPASAAEAQIPVYDWLQYTRYHPPKLPRALRQNAPAKRTP--- 93
            ||..::.|..|..:.:..|..|...:.::..||.                  ...:.|..||   
 Worm   105 ASTGWYSYGQPYQFTANYSIPSLDGNLSDITIPT------------------TAGSSAATTPNAA 151

  Fly    94 ----------GRLPRIPFTPQQLQALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQNRRAR 148
                      |:..|.|:...|:..||..|..:.||:.:..::|:..|.|...:||:||||||.:
 Worm   152 MHLPWAISHDGKKKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQLMLDEKQVKVWFQNRRMK 216

  Fly   149 ERREKREKDESCDSTFSSNASSPEPEMIVVT 179
            :::.::..            |.|.|....||
 Worm   217 DKKLRQRH------------SGPFPHGAPVT 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 15/48 (31%)
nob-1NP_001369824.1 Homeodomain 163..219 CDD:459649 19/55 (35%)

Return to query results.
Submit another query.