DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15696 and Hoxd8

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_032302.2 Gene:Hoxd8 / 15437 MGIID:96209 Length:289 Species:Mus musculus


Alignment Length:226 Identity:51/226 - (22%)
Similarity:81/226 - (35%) Gaps:73/226 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ASLGVLQRLRASLPF---HPYAHPASYVSKESGGSP-------------PASAAEAQIPV----- 65
            |:|.:.....|..|.   ||:.||:.......||.|             |.:|.:|..|.     
Mouse    51 AALQLYGNSAAGFPHAHPHPHPHPSPPPGCGGGGGPGPGQDYFHAGAGSPTAAYQAAPPPPHPPP 115

  Fly    66 ---------------------YDWLQ----YTRYHPPKL----------------PRALRQ-NAP 88
                                 ||.||    :|.....:|                |..|.| ::|
Mouse   116 PPPPPPCGGIACHGEPAKFYGYDNLQRQPIFTTQQEAELVQYPDCKSSSGNIGEDPDHLNQSSSP 180

  Fly    89 AKRTPGRLP---------RIPFTPQQLQALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQN 144
            ::..|...|         |..::..|...||..:..:.||:.:...:::.:|.||..:|||||||
Mouse   181 SQMFPWMRPQAAPGRRRGRQTYSRFQTLELEKEFLFNPYLTRKRRIEVSHTLALTERQVKIWFQN 245

  Fly   145 RRARERREKREKDESCDSTFSSNASSPEPEM 175
            ||.:.::| ..||:...|...:....|:.|:
Mouse   246 RRMKWKKE-NNKDKFPASRPEAKDGDPKKEV 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 15/57 (26%)
Hoxd8NP_032302.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..125 12/62 (19%)
COG5576 139..272 CDD:227863 32/133 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..184 4/21 (19%)
Antp-type hexapeptide 183..188 1/4 (25%)
Homeodomain 196..252 CDD:459649 18/55 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 252..289 6/25 (24%)

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