DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15696 and Hoxd1

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_034597.2 Gene:Hoxd1 / 15429 MGIID:96201 Length:328 Species:Mus musculus


Alignment Length:131 Identity:39/131 - (29%)
Similarity:62/131 - (47%) Gaps:30/131 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 HPASY--VSKESGGSP----PASAAEAQIPVYDWLQYTRYHPPKL----------PRALRQNAPA 89
            ||..:  ||...|..|    |.|:..|....::|::..|..|.|.          |.|:|.|   
Mouse   174 HPGPFQTVSPAPGACPKPASPTSSLPAAHSTFEWMKVKRNAPKKSKLSEYGATSPPSAIRTN--- 235

  Fly    90 KRTPGRLPRIPFTPQQLQALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQNRRARERREKR 154
                       |:.:||..||..:..:.||:.....::|:.|:|.:|:|||||||||.::::.:|
Mouse   236 -----------FSTKQLTELEKEFHFNKYLTRARRIEIANCLQLNDTQVKIWFQNRRMKQKKRER 289

  Fly   155 E 155
            |
Mouse   290 E 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 16/48 (33%)
Hoxd1NP_034597.2 PRK12323 <11..217 CDD:481241 12/42 (29%)
Antp-type hexapeptide 204..209 1/4 (25%)
Homeodomain 233..286 CDD:459649 22/66 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..328
Blue background indicates that the domain is not in the aligned region.

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