DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15696 and Gsx2

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_573555.1 Gene:Gsx2 / 14843 MGIID:95843 Length:305 Species:Mus musculus


Alignment Length:212 Identity:53/212 - (25%)
Similarity:75/212 - (35%) Gaps:48/212 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 AGDRYVGTNASLGVLQRLRASLP---------------FHPYAHPASYVSKESGGSPPASAAEA- 61
            ||....|...:|.:|:...:..|               .||..|...:...:..||..|:||.| 
Mouse    91 AGGGVAGGTGALPLLKSQFSPAPGDAQFCPRVSHAHHHHHPPQHHHHHHQPQQPGSAAAAAAAAA 155

  Fly    62 --------------QIPVYDWLQYTRYHPPKLPRALRQNAPAKRTP-GRLPRIPFTPQQLQALEN 111
                          ..||.....|....|.:........:...:.| |:..|..||..||..||.
Mouse   156 AAAAAAAALGHPQHHAPVCAATTYNMSDPRRFHCLSMGGSDTSQVPNGKRMRTAFTSTQLLELER 220

  Fly   112 AYKESNYLSAEDANKLADSLELTNTRVKIWFQNRRARERRE----KREKDESC------------ 160
            .:..:.|||.....::|..|.|:..:|||||||||.:.::|    .|....||            
Mouse   221 EFSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGASRNNHTSCKCVGSQAHYARS 285

  Fly   161 -DSTFSSNASSPEPEMI 176
             |....|.||:.|.:.|
Mouse   286 EDEDSLSPASANEDKEI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 18/48 (38%)
Gsx2NP_573555.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 115..151 6/35 (17%)
Homeodomain 204..260 CDD:459649 22/55 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..305 10/44 (23%)

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