DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15696 and CDX2

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:XP_011533177.1 Gene:CDX2 / 1045 HGNCID:1806 Length:321 Species:Homo sapiens


Alignment Length:171 Identity:45/171 - (26%)
Similarity:67/171 - (39%) Gaps:46/171 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 PFHPYAHPASYVSKESG---------GSPPASAAEAQIPVYDWLQYTRYHPPKLPRALRQN---- 86
            |.|...|||:..|..||         ..|.|:||..|:.               |...|:|    
Human   119 PHHHPHHPAAAPSCASGLLQTLNPGPPGPAATAAAEQLS---------------PGGQRRNLCEW 168

  Fly    87 --APAKRTPGRLP----------------RIPFTPQQLQALENAYKESNYLSAEDANKLADSLEL 133
              .||:::.|...                |:.:|..|...||..:..|.|::.....:||.:|.|
Human   169 MRKPAQQSLGSQALTSPSSTVKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGL 233

  Fly   134 TNTRVKIWFQNRRARERREKREKDESCDSTFSSNASSPEPE 174
            :..:||||||||||:||:..::|.:............|.|:
Human   234 SERQVKIWFQNRRAKERKINKKKLQQQQQQQPPQPPPPPPQ 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 16/64 (25%)
CDX2XP_011533177.1 Caudal_act 13..179 CDD:461413 18/74 (24%)
Homeodomain 196..251 CDD:459649 22/54 (41%)

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