DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15696 and nkx2-3

DIOPT Version :10

Sequence 1:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster
Sequence 2:XP_002937234.1 Gene:nkx2-3 / 100486189 XenbaseID:XB-GENE-852996 Length:328 Species:Xenopus tropicalis


Alignment Length:202 Identity:56/202 - (27%)
Similarity:81/202 - (40%) Gaps:53/202 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SDFSIEYILNRAGDR--YVGTNASLGVLQRLRASLPFHPYA-HPASYVS---------------K 48
            |||.....:..||:|  |.|....|..|..:.|:.|..... .|..||:               :
 Frog    52 SDFQQASCMLAAGERCVYAGGEDKLPFLSAMGAAEPHGDVGLSPDRYVALRDPKEEDEEEEDSLR 116

  Fly    49 ESGG-------SPPASAAEAQIPVYDWLQYTRYHPPKLPRALRQNAPAKRTPGRLPRIPFTPQQL 106
            |.|.       ||....              :...|..|         |:...|.||:.|:..|:
 Frog   117 EGGNKSCFLNKSPDGEG--------------KLEDPDRP---------KQRSRRKPRVLFSQAQV 158

  Fly   107 QALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQNRRARERREKREKDESCDSTFSSNASSP 171
            ..||..:|:..||||.:...||:||:||:|:|||||||||.:.:|::::|     |........|
 Frog   159 FELERRFKQQRYLSAPEREHLANSLKLTSTQVKIWFQNRRYKCKRQRQDK-----SLEMGTHHPP 218

  Fly   172 EPEMIVV 178
            .|..:.|
 Frog   219 PPRRVAV 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 24/48 (50%)
nkx2-3XP_002937234.1 Homeodomain 147..203 CDD:459649 28/55 (51%)

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