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Protein Alignment Synd and LSB1
DIOPT Version :9
Sequence 1: | NP_001262786.1 |
Gene: | Synd / 42467 |
FlyBaseID: | FBgn0053094 |
Length: | 495 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_011652.1 |
Gene: | LSB1 / 853037 |
SGDID: | S000003368 |
Length: | 241 |
Species: | Saccharomyces cerevisiae |
Alignment Length: | 102 |
Identity: | 32/102 - (31%) |
Similarity: | 53/102 - (51%) |
Gaps: | 21/102 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 403 RNSSVTNG------NGKVDANPFDEEEEWDESDNVLVDNGEPGVPVKALYDYEGAESDELTFKQG 461
:.|:|.:| |.|: .|:||.:.. ...|.:....|:||||:|..:..:|:.|.|
Yeast 21 KESNVISGDIFELINSKL-------PEKWDGNQR-SPQNADTEEYVEALYDFEAQQDGDLSLKTG 77
Fly 462 D---VFEKLEDEDEQGWCKGRMNGRVGLYPANYVETA 495
| |.||:..: |.:|:.|.::|::|||||:.|
Yeast 78 DKIQVLEKISPD----WYRGKSNNKIGIFPANYVKPA 110
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R2056 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.030 |
|
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