Protein Alignment Synd and pstpip1b

DIOPT Version :9

• Sequence 1: NP_001262786.1
• Gene: Synd / 42467
• FlyBaseID: FBgn0053094
• Length: 495
• Species: Drosophila melanogaster
• Sequence 2: NP_001032668.1
• Gene: pstpip1b / 641582
• ZFINID: ZDB-GENE-051127-25
• Length: 379
• Species: Danio rerio
• Alignment Length: 471
• Identity: 100/471 - (21%)
• Similarity: 177/471 - (37%)
• Gaps: 127/471 - (26%)

  Fly    36 LCNDLQQLIQERADIEKGYAKSLRTWSKKWGELIEKGPEYGTTEAAWKGVLTESERISDVHMKIK 100
            :|.|:::|::.||..|:.|.:.|...::|    .|...|.||.:|::.....|.|:..::|:::.
Zfish     1 MCKDVEELLKMRALAEEKYGRDLVAIARK----AEGQTEIGTLKASFDKFKEEIEKTGNLHIQLS 61

  Fly   101 DNLCNDVNSQIKTWQKENYHHTLMQIKERKDLEDLFKKAQKPWAKLLAKVEKAKADYHSACK--- 162
            :.:..:| .:|:.:::.       |.::||.||::.:|.|||...|..|..::|..|...||
Zfish    62 ERIKEEV-LKIEVFREH-------QREQRKKLEEIIEKLQKPKMVLHKKTMESKRLYEQRCKEAD 118

  Fly   163 TERSATNQERNANADSSLSPDQVKKMHDRVQKTKDQVQKCRE-------KYEQAIAEITKYNSVY 220
            ....|..::.|.|..:          |.:.:|..::.:.||:       :|...:.::.|    .
Zfish   119 ESEQALGKKTNVNTST----------HRQSEKVMNRARLCRQAANLAEKQYRWNVDQLGK----T 169

  Fly   221 IEDMTSVFEK-CQTF---EKTRLQFFKEILFNVHSCLDLTKVQSLPQIYEEFSHTINNADQQKDL 281
            .:|..|.:.. |:.|   |..|:...:.:|:...:.|....||. ...|||....:...|...|
Zfish   170 CQDWESTYRSACEVFQQQESERINILRCVLWEHCNLLSKQCVQD-DDCYEEVRKILEQCDIVAD- 232

  Fly   282 KWWSNNHGINMAMNWPSFVEYTEEFRDIAKGNKSKEALPAAPITLINQRPVAEDVHQEYPQTNSL 346
                ||:.|.|                     |...:.|.|||..           |.|
Zfish   233 ----NNNFIKM---------------------KKTSSHPPAPIEF-----------QCY------ 255

  Fly   347 KKNTSTLSSVSSRASVKSEIATTQSSVTTSEAKTSAAVAGAATATAAATAASAASNRNSSVTNGN 411
                   |...:...|: .|.|.:.||..|....|.             ...|::|..:..|...
Zfish   256 -------SDADTNGGVR-RIETNRLSVVLSGMSFSG-------------FPEASNNSGAKYTPDQ 299

  Fly   412 GKVDANPFDEEEEWDESDNVLVDNGEPGVPVKALYDYEGAESDELTFKQGDVFEKLEDEDEQGWC 476
            .::...    ||::                 ..||:::..|.|||:..:|.|. .:.::.|.||.
Zfish   300 QRIGVT----EEKY-----------------MVLYEFKAQEDDELSISKGQVV-TITEKGEDGWW 342

  Fly   477 KGRMNGRVGLYPANYV 492
            |...||..||.|..|:
Zfish   343 KAWCNGVSGLVPGTYL 358

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Synd	NP_001262786.1	F-BAR_PACSIN	17..272	CDD:153339	56/249 (22%)
		SH3_PACSIN	441..493	CDD:212777	18/52 (35%)
pstpip1b	NP_001032668.1	BAR	1..225	CDD:299863	56/250 (22%)
		SH3_PSTPIP1	308..360	CDD:212758	18/69 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D727724at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.920