Protein Alignment Synd and si:ch211-51c14.1

DIOPT Version :10

• Sequence 1: NP_001262786.1
• Gene: Synd / 42467
• FlyBaseID: FBgn0053094
• Length: 495
• Species: Drosophila melanogaster
• Sequence 2: XP_697258.2
• Gene: si:ch211-51c14.1 / 568811
• ZFINID: ZDB-GENE-120215-48
• Length: 389
• Species: Danio rerio
• Alignment Length: 484
• Identity: 157/484 - (32%)
• Similarity: 239/484 - (49%)
• Gaps: 111/484 - (22%)

  Fly    12 AGSDSFWEPGNYKRTTKRIEDGYKLCNDLQQLIQERADIEKGYAKSLRTWSKKWGELIEKGPEYG 76
            |.:.|||.||||.:|.||.||.::.|||:....||||.:|:.||:.|..||.||..|::..|.||
Zfish    13 ANNQSFWMPGNYHQTVKRTEDSFQACNDIVACFQERARVERQYAQQLSEWSAKWKPLVDASPLYG 77

  Fly    77 TTEAAWKGVLTESERISDVHMKIKDNLCNDVNSQIKTWQKENYHHTLM-QIKERKDLEDLFKKAQ 140
            :...||:..|:.::|:|.:|..|...|.::...:|:|||||.:|..:. ..||.:|.|..|.:||
Zfish    78 SLLRAWQCFLSSADRLSSLHSSICRALVSEDGDRIRTWQKETFHKKIFGGFKESQDFETGFSRAQ 142

  Fly   141 KPWAKLLAKVEKAKADYHSACKTERSATNQERNANADSSLSPDQVKKMHDRVQKTKDQVQKCREK 205
            |||||.|.|:|||::.:|.||:.|..|..:|.:|..:..::.::.:|:.:..:....:.:|.|.:
Zfish   143 KPWAKRLKKLEKARSAFHKACRKEHMARERETHAQGNPDIAIEKQRKIQEETELAHQETEKVRAR 207

  Fly   206 YEQAIAEITKYNSVYIEDMTSVFEKCQTFEKTRLQFFKEILFNVHSCLDLTKVQSLPQIYEEFSH 270
            ||:.:.|:|:|...|:|:|.|:|::.|..|:.|:.|.|:...::|..||:|..:|:..:|.|...
Zfish   208 YEKVLEEVTRYAPRYMEEMESIFDQSQEEERKRISFLKQAFLSIHRHLDVTNNESVKAVYNELHD 272

  Fly   271 TINNADQQKDLKWWSNNHGINMAMNWPSFVEYTEEFRDIAKGNKSKEALPAAPITLINQRPVAED 335
            |:.:..:|:||:||.|.||..|..:||.|.|:|.:
Zfish   273 TLMSISEQEDLRWWKNTHGPGMPTDWPQFQEWTPD------------------------------ 307

  Fly   336 VHQEYPQTNSLKKNTSTLSSVSSRASVKSEIATTQSSVTTSEAKTSAAVAGAATATAAATAASAA 400
                       ||:......|..:|:|...
Zfish   308 -----------KKHKKGKKEVEQKAAVMER----------------------------------- 326

  Fly   401 SNRNSSVTNGNGKVDANPFDEEEEWDESDNVLVDNGEPGVPVKALYDYEGAESDELTFKQGDVFE 465
                 ||..|                            ||.|:|||||.|.|:|||:||.|:.|.
Zfish   327 -----SVMIG----------------------------GVRVRALYDYVGQETDELSFKAGEEFL 358

  Fly   466 KLEDEDEQGWCKGRMN-GRVGLYPANYVE 493
            |:||||:||||:|.|: |:.|||||||||
Zfish   359 KIEDEDDQGWCRGMMDGGKEGLYPANYVE 387

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Synd	NP_001262786.1	F-BAR_PACSIN	17..272	CDD:153339	94/255 (37%)
		SH3_PACSIN	441..493	CDD:212777	34/52 (65%)
si:ch211-51c14.1	XP_697258.2	F-BAR_PACSIN	18..275	CDD:153339	95/256 (37%)
		SH3	332..387	CDD:473055	36/54 (67%)