Protein Alignment Synd and imp2

DIOPT Version :9

• Sequence 1: NP_001262786.1
• Gene: Synd / 42467
• FlyBaseID: FBgn0053094
• Length: 495
• Species: Drosophila melanogaster
• Sequence 2: NP_596391.1
• Gene: imp2 / 2540112
• PomBaseID: SPBC11C11.02
• Length: 670
• Species: Schizosaccharomyces pombe
• Alignment Length: 671
• Identity: 121/671 - (18%)
• Similarity: 232/671 - (34%)
• Gaps: 216/671 - (32%)

  Fly    14 SDSFWEPGN--YKRTTKRIEDGYKLCNDLQQLIQERADIEKGYAKSLRTWSKKWGELIEKGPEYG 76
            |:.||...:  |.....|..|...:..:|:....|||:||:.|||.:...|:.....:|.    |
pombe    19 SNYFWGANDEGYHALLSRFSDVKHINEELRSFYHERANIEEDYAKRMAKLSRTTFSSLET----G 79

  Fly    77 TTEAAWKGVLTESERISDVHMKIKDNLCNDVNSQIKTWQKENYHHTLMQIKERKDLEDLFKKAQK 141
            ..:.:.:.:..|.:.::..|::|...|.:||.:....:        ...:|::|.:  :....:|
pombe    80 CLKESVQVMKAEVDNMAKSHLQISQLLQDDVENAFTRY--------AASLKDKKKM--IVSGIEK 134

  Fly   142 PWAKLLAK---VEKAKADYHSACKTERSATNQERNANADSSLSPDQVKKMHDRVQKTKDQVQKCR 203
            .....|:|   :.||:..||..||......:|:      :.|...:::|.:.::.||::.:....
pombe   135 VHKDKLSKHQALVKAQDKYHYLCKKVNYYVSQQ------NMLFGKELEKNNAKLNKTQNAITASS 193

  Fly   204 EKYEQAIAEITKYNSVYIEDMTSVFEKCQTFEKTRLQFFKEILF--------------------- 247
            ..|:.|:|.:....:.:..:..|..:|.|..|:.|..|.|.:::
pombe   194 SDYQSAVAAVRDSYARWTNEWRSTCDKLQDIEEERRHFLKSVMWTFTLLISRSCFNDDQACERIR 258

  Fly   248 -NVHSC---------LDL----TKVQSLPQIYEEFSHTINNAD--------QQKDLKWWSNNHGI 290
             |:..|         :|.    |.:...|:.|:.:...:.:..        |:...|..::|..:
pombe   259 KNLEQCSVSQDVLEFIDAKSTGTGIPQPPKFYDYYKGEVPDDSVELVQANFQRAQTKIENDNMPL 323

  Fly   291 NMAM-----------------NWPSFVE--------------------YTEEFRDIAK------G 312
            |...                 |.||.::                    :..:|:..::      |
pombe   324 NRPYVLSATARNESSFENTLPNTPSAIQSLTTVSSNSSQNGRSSPKKSFLSKFKLTSRPSTPNVG 388

  Fly   313 NKSKEALPA----APITLI----------------NQRPVAEDVHQEYPQTNSLKKNTSTLSSVS 357
            |.:.:||.:    :|:|..                |..|.|...   :|.:|:|....:.|.|:.
pombe   389 NTAPDALSSPRNDSPLTSAADEQMKHLSLQEEPKQNPTPAAPGA---FPNSNTLPPRYNELGSLP 450

  Fly   358 SRASV---------------KSEIATTQSSVTTSEAKTSAAV---------------AGAATATA 392
            |..||               :.:|.....||...|.:..:.|               ...:....
pombe   451 SPNSVSFTEDSRPNVNTPSRRQQIQEEFGSVLQMENRAVSPVYDSRKNGSRSSFTLRKSRSPKRP 515

  Fly   393 AATAASAASNRNSSVTNGN--------GKVD----ANPFDEEEEWDESDNVL------------- 432
            :::.:..||....|:|.||        .:||    ..|.|:|...|...:.:
pombe   516 SSSLSQNASRLPRSLTPGNLEPNYDFGVRVDPASGTAPTDDEPYTDRDSSFVDDTINTKATGNTS 580

  Fly   433 ---------VDNGEPGVP-------------VKALYDYEGAESDELTFKQGDVFEKLEDEDEQGW 475
                     .|.|:..:.             |.|||||:.|..:|::|::||....|: ..|.||
pombe   581 NRLSLPAYPTDGGDTSIDNPTSTDGQRILGYVSALYDYDAAIPEEISFRKGDTIAVLK-LYEDGW 644

  Fly   476 CKGRMNG----RVGLYPANYV 492
            .:|.:.|    ..|.:|:|:|
pombe   645 WEGFVVGEDDHNRGQFPSNFV 665

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Synd	NP_001262786.1	F-BAR_PACSIN	17..272	CDD:153339	55/294 (19%)
		SH3_PACSIN	441..493	CDD:212777	21/69 (30%)
imp2	NP_596391.1	F-BAR_PombeCdc15_like	24..259	CDD:153335	47/254 (19%)
		SH3	610..666	CDD:214620	21/57 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23065
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010