Protein Alignment Synd and Pstpip1

DIOPT Version :9

• Sequence 1: NP_001262786.1
• Gene: Synd / 42467
• FlyBaseID: FBgn0053094
• Length: 495
• Species: Drosophila melanogaster
• Sequence 2: XP_006510928.1
• Gene: Pstpip1 / 19200
• MGIID: 1321396
• Length: 434
• Species: Mus musculus
• Alignment Length: 501
• Identity: 113/501 - (22%)
• Similarity: 193/501 - (38%)
• Gaps: 120/501 - (23%)

  Fly    16 SFW-----EPGNYKRTTKRIEDGYKLCNDLQQLIQERADIEKGYAKSLRTWSKKWGELIEKGPEY 75
            :||     ....|:...:|:.||.|:|.|:::|:::||..|:.|.|.|...::|.|
Mouse    29 TFWCRDFTAHTGYEVLLQRLLDGRKMCKDVEELLRQRAQAEERYGKELVQIARKAG--------- 84

  Fly    76 GTTE-----AAWKGVLTESERISDVHMKIKDNLCNDVNS--QIKTWQKENYHHTLMQIKERKDLE 133
            |.||     .::..:..::|.:...|:::...|..::.|  :.:..|||          :||..|
Mouse    85 GQTEMNSLRTSFDSLKQQTENVGSAHIQLALALREELRSLEEFRERQKE----------QRKKYE 139

  Fly   134 DLFKKAQKPWAKLLAKVEKAKADYHSACKTERSATNQERNANADSSLSPDQVKKMHDRVQKTKDQ 198
            .:..:.||....|..|..::|..|...|:....|.......:|:.  ...||:|..::.::.|:.
Mouse   140 AIMDRVQKSKLSLYKKTMESKKAYDQKCRDADDAEQAFERVSANG--HQKQVEKSQNKAKQCKES 202

  Fly   199 VQKCREKYEQAIAEITKYNSVYIEDMTSVFEKCQTFEKTRLQFFKEILFNVHSCLDLTKVQSL-- 261
            ..:....|.|.|.::.:..:.:.::..:..|..|..|..||...:..|: || |..|: :|.:
Mouse   203 ATEAERVYRQNIEQLERARTEWEQEHRTTCEAFQLQEFDRLTILRNALW-VH-CNQLS-MQCVKD 264

  Fly   262 PQIYEEFSHTINNADQQKDLKWWSNNHGINMAMNWPSFVEYTEEFRDIAKGNKSKEALPAAPITL 326
            .::|||...|:...|.:.|:.               .|::           :||....|.||:.
Mouse   265 DELYEEVRLTLEGCDVEGDIN---------------GFIQ-----------SKSTGREPPAPVP- 302

  Fly   327 INQRPVAEDVHQEYPQTNSLKKNTSTLSSVSSRASVKSEIATTQSSVTTSEAKTSAAVAGAATAT 391
                      :|.|..    ::.|..:.|.|.:.|  ..:....|.:.....||:.:...|:|.|
Mouse   303 ----------YQNYYD----REVTPLIGSPSVQPS--CGVIKRFSGLLHGSPKTTPSAPAASTET 351

  Fly   392 AAATAASAASNRNSSV--------TNGNGKVDANPFDEEEEWDESDNVLVDNGEPGVPVKALYDY 448
            ...|     ..||..|        |.||....|..:                       :|||||
Mouse   352 LTPT-----PERNELVYASIEVQATQGNLNSSAQDY-----------------------RALYDY 388

  Fly   449 EGAESDELTFKQGDVFEK-LEDEDEQGWCKGRMNGRVGLYPANYVE 493
            ....||||....||:... ||.||  ||.....||:.|..|.:|:|
Mouse   389 TAQNSDELDISAGDILAVILEGED--GWWTVERNGQRGFVPGSYLE 432

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Synd	NP_001262786.1	F-BAR_PACSIN	17..272	CDD:153339	61/268 (23%)
		SH3_PACSIN	441..493	CDD:212777	22/52 (42%)
Pstpip1	XP_006510928.1	F-BAR_PSTPIP1	35..276	CDD:153355	60/264 (23%)
		SH3_PSTPIP1	381..433	CDD:212758	23/77 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D727724at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920