Protein Alignment Synd and B0303.7

DIOPT Version :9

• Sequence 1: NP_001262786.1
• Gene: Synd / 42467
• FlyBaseID: FBgn0053094
• Length: 495
• Species: Drosophila melanogaster
• Sequence 2: NP_498918.3
• Gene: B0303.7 / 176220
• WormBaseID: WBGene00015128
• Length: 493
• Species: Caenorhabditis elegans
• Alignment Length: 474
• Identity: 88/474 - (18%)
• Similarity: 145/474 - (30%)
• Gaps: 157/474 - (33%)

  Fly   100 KDNLC------NDVNSQIKTWQKENYHHTLMQIKERKDLEDLFKKAQKP---------------- 142
            |.|:|      |.:|..|.|        :...:...|   .||:.|::|
 Worm    12 KPNICGTSGNSNGINENIDT--------STFSVSAAK---ALFESAKRPEVRNAAIAAAKNPFVR 65

  Fly   143 -WAKLLAKVEKAKADYHSACKTERSATNQ--------ERNANADS---------SLSPDQVKKMH 189
             .||.:|:.|||:....:|.| :.|..|:        :.|..:||         ..||.::...|
 Worm    66 QTAKNVAQDEKARGAVLNAVK-DPSGGNKISAAFAVADANRKSDSVPPPPPHRGGTSPGKLSGSH 129

  Fly   190 DRVQKTKDQVQKCREKYEQAIAEITKYNSVYIEDMTSVFEKCQTFEKTRLQFFKEILFNVHSCLD 254
            ..:   :.|::..........:..:.....|..:.||.:..........:.
 Worm   130 SAI---RSQLENMHIGGSVMSSNSSTATPSYQSNSTSSYSSSAPVAPPPVP-------------- 177

  Fly   255 LTKVQSLPQIYEEFSHTINNADQQKDLKWWSNNHGINMAMNWPSFVEYTEEFRDIAKGNKSKEAL 319
             ...||:|      |::....         |..:||             .:| |.|.....:..|
 Worm   178 -RHTQSIP------SYSAPAI---------STPYGI-------------AKF-DYAPTQSDEMGL 212

  Fly   320 PAAPITLINQRPVAEDVHQEYPQTNSLKKNTSTLSSV-SSRASVKSEIATTQSSVTTSEAKTS-- 381
            ......||:::..||..:.|       .:|..|...| ||...:|         :...||.|:
 Worm   213 RIGDTVLISKKVDAEWFYGE-------NQNQRTFGIVPSSYLDIK---------IPLKEAFTALP 261

  Fly   382 ---AAVAGAATATAAATAASAASNRNSSVTNGNGKVDANPFDEEEEWDESD-------------- 429
               ||.:|:::.|.|.......||....:....|..........|||.|.:
 Worm   262 PRPAAPSGSSSGTYATAIYDYNSNEAGDLNFAVGSQIMVTARVNEEWLEGECFGRSGIFPSQFVD 326

  Fly   430 ---------------------NVLVDNGEPGVPVKALYDYEGAESDELTFKQGDVFEKLEDEDEQ 473
                                 :.:.:|..|...|...|||:...:.:|...:|||...|||.|.|
 Worm   327 CPNLYQVPMKQSAPSSAPSYSHPITNNSGPKQTVTVSYDYDSGVASDLRLFEGDVITALEDIDAQ 391

  Fly   474 GWCKGRMNGRVGLYPANYV 492
             |......|:.|:.|..::
 Worm   392 -WLLAECRGQQGMVPKTFL 409

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Synd	NP_001262786.1	F-BAR_PACSIN	17..272	CDD:153339	36/211 (17%)
		SH3_PACSIN	441..493	CDD:212777	17/52 (33%)
B0303.7	NP_498918.3	SH3	194..247	CDD:214620	16/73 (22%)
		SH3	275..326	CDD:302595	8/50 (16%)
		SH3	356..409	CDD:214620	18/53 (34%)
		SH3	432..490	CDD:214620

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2056
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.030