Sequence 1: | NP_001262786.1 | Gene: | Synd / 42467 | FlyBaseID: | FBgn0053094 | Length: | 495 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002939011.2 | Gene: | pacsin1 / 100494558 | XenbaseID: | XB-GENE-494779 | Length: | 446 | Species: | Xenopus tropicalis |
Alignment Length: | 504 | Identity: | 203/504 - (40%) |
---|---|---|---|
Similarity: | 296/504 - (58%) | Gaps: | 69/504 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSHHSDDQL--LQAGSDSFWEPGNYKRTTKRIEDGYKLCNDLQQLIQERADIEKGYAKSLRTWSK 63
Fly 64 KWGELIEKGPEYGTTEAAWKGVLTESERISDVHMKIKDNLCNDVNSQIKTWQKENYHHTLM-QIK 127
Fly 128 ERKDLEDLFKKAQKPWAKLLAKVEKAKADYHSACKTERSATNQERNANADSSLSPDQVKKMHDRV 192
Fly 193 QKTKDQVQKCREKYEQAIAEITKYNSVYIEDMTSVFEKCQTFEKTRLQFFKEILFNVHSCLDLTK 257
Fly 258 VQSLPQIYEEFSHTINNADQQKDLKWWSNNHGINMAMNWPSFVEYTEEF-RDIAKGNKSKEALPA 321
Fly 322 APITLINQRPVAEDVHQEYPQTNSLKKNTSTLSSVSSRASVKSEIATTQSSVTTSEAKTSAAVAG 386
Fly 387 AATA---TAAATA--ASAASNRNSSVTNGNGKVDANPFDEEEEWDESDNVLVDNGEPGVPVKALY 446
Fly 447 DYEGAESDELTFKQGDVFEKLEDEDEQGWCKGRM-NGRVGLYPANYVET 494 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Synd | NP_001262786.1 | F-BAR_PACSIN | 17..272 | CDD:153339 | 119/255 (47%) |
SH3_PACSIN | 441..493 | CDD:212777 | 36/52 (69%) | ||
pacsin1 | XP_002939011.2 | F-BAR_PACSIN1 | 19..276 | CDD:153364 | 120/256 (47%) |
SH3_PACSIN1-2 | 390..445 | CDD:212931 | 38/54 (70%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 230 | 1.000 | Domainoid score | I2400 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 423 | 1.000 | Inparanoid score | I1741 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D432948at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001073 | |
OrthoInspector | 1 | 1.000 | - | - | otm47852 | |
Panther | 1 | 1.100 | - | - | O | PTHR23065 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X728 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.160 |