DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17272 and CMD1

DIOPT Version :10

Sequence 1:NP_650917.1 Gene:CG17272 / 42465 FlyBaseID:FBgn0038830 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_009667.1 Gene:CMD1 / 852406 SGDID:S000000313 Length:147 Species:Saccharomyces cerevisiae


Alignment Length:131 Identity:47/131 - (35%)
Similarity:76/131 - (58%) Gaps:7/131 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARYFKEQDIDEFRECFYLFAR--SGQINNLDELTVIMRSLGLSPTIQELVSYLKQ----KNGKM 59
            |:....|:.|.||:|.|.||.:  :|.|:: .||..:||||||||:..|:...:.:    .|.::
Yeast     1 MSSNLTEEQIAEFKEAFALFDKDNNGSISS-SELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 64

  Fly    60 SFADFLDIMHQHSKVESLPDEVIAAFKAADPQNKGTISARQLRNLLQNWGEGLSMREVDNIFREA 124
            .|::||.:|.:..|......|::.|||..|....|.|||.:|:::|.:.||.|:..|||::.||.
Yeast    65 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV 129

  Fly   125 N 125
            :
Yeast   130 S 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17272NP_650917.1 PTZ00184 1..143 CDD:185504 47/131 (36%)
CMD1NP_009667.1 PTZ00184 1..145 CDD:185504 47/131 (36%)

Return to query results.
Submit another query.