DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17272 and CAM8

DIOPT Version :9

Sequence 1:NP_650917.1 Gene:CG17272 / 42465 FlyBaseID:FBgn0038830 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_193200.1 Gene:CAM8 / 827114 AraportID:AT4G14640 Length:151 Species:Arabidopsis thaliana


Alignment Length:140 Identity:50/140 - (35%)
Similarity:82/140 - (58%) Gaps:6/140 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KEQDIDEFRECFYLFARSGQ-INNLDELTVIMRSLGLSPTIQELVSYLKQ----KNGKMSFADFL 65
            |:| |.||:|.|.||.:.|. ...::||..::|||..:||.|||...:.:    .||.:.||:||
plant     8 KDQ-ITEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEQELHDIITEIDSDSNGTIEFAEFL 71

  Fly    66 DIMHQHSKVESLPDEVIAAFKAADPQNKGTISARQLRNLLQNWGEGLSMREVDNIFREANVNNNS 130
            ::|.:..:.....:|:..|||..|....|.|||.:|.:::.|.||.|:..||:.:.:||:::.:.
plant    72 NLMAKKLQESDAEEELKEAFKVFDKDQNGYISASELSHVMINLGEKLTDEEVEQMIKEADLDGDG 136

  Fly   131 TVRYADFVKI 140
            .|.|.:|||:
plant   137 QVNYDEFVKM 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17272NP_650917.1 PTZ00184 1..143 CDD:185504 50/140 (36%)
CAM8NP_193200.1 PTZ00184 6..148 CDD:185504 50/140 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1386217at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23050
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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