DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17272 and TCH3

DIOPT Version :9

Sequence 1:NP_650917.1 Gene:CG17272 / 42465 FlyBaseID:FBgn0038830 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_001189723.1 Gene:TCH3 / 818709 AraportID:AT2G41100 Length:324 Species:Arabidopsis thaliana


Alignment Length:169 Identity:41/169 - (24%)
Similarity:80/169 - (47%) Gaps:22/169 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARYFKEQDIDEFRECFYLFARSGQIN-NLDELTVIMRSLGLSPTIQELVSYLKQ----KNGKMS 60
            ||....:..|.|:||.|.||.::|..: ...||..:|.|||.:.|..:|...:.:    .:|.:.
plant    90 MADKLTDDQITEYRESFRLFDKNGDGSITKKELRTVMFSLGKNRTKADLQDMMNEVDLDGDGTID 154

  Fly    61 FADFLDIMHQHSKVESLP--------------DEVI---AAFKAADPQNKGTISARQLRNLLQNW 108
            |.:||.:|.::...:..|              |:::   .||:..|....|.|:..:||..:::.
plant   155 FPEFLYLMAKNQGHDQAPRHTKKTMVDYQLTDDQILEFREAFRVFDKNGDGYITVNELRTTMRSL 219

  Fly   109 GEGLSMREVDNIFREANVNNNSTVRYADFVKIACAPVPD 147
            ||..:..|:.::..||:.:.:.|:.:::||.:....:.|
plant   220 GETQTKAELQDMINEADADGDGTISFSEFVCVMTGKMID 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17272NP_650917.1 PTZ00184 1..143 CDD:185504 40/163 (25%)
TCH3NP_001189723.1 PTZ00184 1..162 CDD:185504 22/71 (31%)
PTZ00184 90..255 CDD:185504 40/164 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1386217at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.