DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17272 and myl12b

DIOPT Version :10

Sequence 1:NP_650917.1 Gene:CG17272 / 42465 FlyBaseID:FBgn0038830 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_001004813.1 Gene:myl12b / 448060 XenbaseID:XB-GENE-991019 Length:172 Species:Xenopus tropicalis


Alignment Length:140 Identity:43/140 - (30%)
Similarity:72/140 - (51%) Gaps:7/140 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FKEQDIDEFRECFYLF--ARSGQINNLDELTVIMRSLGLSPTIQELVSYLKQKNGKMSFADFLDI 67
            |.:..|.||:|.|.:.  .|.|.|:. ::|..::.||..:||.:.|.:.:.:..|.::|..||.:
 Frog    26 FDQSQIQEFKEAFNMIDQNRDGFIDK-EDLHDMLASLEKNPTDEYLDAMMNEAPGPINFTMFLTM 89

  Fly    68 MHQHSKVESL-PDEVIA-AFKAADPQNKGTISARQLRNLLQNWGEGLSMREVDNIFREANVNNNS 130
            ..:  |:... |::||. ||...|.:..|:|....||.||...|:..:..|||.:||||.::...
 Frog    90 FGE--KLNGTDPEDVIRNAFACFDEEGIGSIQEDTLRELLTTMGDRFTDEEVDELFREAPIDKKG 152

  Fly   131 TVRYADFVKI 140
            ...|.:|.:|
 Frog   153 NFNYNEFTRI 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17272NP_650917.1 PTZ00184 1..143 CDD:185504 43/140 (31%)
myl12bNP_001004813.1 PTZ00184 25..163 CDD:185504 43/140 (31%)

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