DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17272 and tnnc1a

DIOPT Version :9

Sequence 1:NP_650917.1 Gene:CG17272 / 42465 FlyBaseID:FBgn0038830 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_852475.3 Gene:tnnc1a / 353247 ZFINID:ZDB-GENE-030523-1 Length:161 Species:Danio rerio


Alignment Length:148 Identity:42/148 - (28%)
Similarity:80/148 - (54%) Gaps:11/148 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ARYFKEQDIDEFRECFYLF---ARSGQINNLDELTVIMRSLGLSPT---IQELVSYLKQK-NGKM 59
            |....::..:|||..|.:|   |..|.|:. .||..:||.||.:||   :||::..:.:. :|.:
Zfish     9 AEQLTDEQKNEFRAAFDIFVQDAEDGCIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTV 72

  Fly    60 SFADFLDIMHQHSKVES--LPDEVIA-AFKAADPQNKGTISARQLRNLLQNWGEGLSMREVDNIF 121
            .|.:||.:|.:..|.:|  .|:|.:| .|:..|....|.|...:|:.:|:..||.::..:::.:.
Zfish    73 DFEEFLVMMVRCMKDDSKGRPEEELAELFRMFDKNADGYIDLDELKLMLEATGEAITEDDIEELM 137

  Fly   122 REANVNNNSTVRYADFVK 139
            |:.:.||:..:.|.:|::
Zfish   138 RDGDKNNDGKIDYDEFLE 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17272NP_650917.1 PTZ00184 1..143 CDD:185504 42/148 (28%)
tnnc1aNP_852475.3 EFh_PEF 9..157 CDD:330173 42/148 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1386217at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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