DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17272 and Calml3

DIOPT Version :10

Sequence 1:NP_650917.1 Gene:CG17272 / 42465 FlyBaseID:FBgn0038830 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_001012054.1 Gene:Calml3 / 307100 RGDID:1305499 Length:149 Species:Rattus norvegicus


Alignment Length:143 Identity:51/143 - (35%)
Similarity:79/143 - (55%) Gaps:5/143 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MARYFKEQDIDEFRECFYLFARSGQ-INNLDELTVIMRSLGLSPT---IQELVSYL-KQKNGKMS 60
            ||....|:.|.||:|.|.||.:.|. .....||..:|||||.:||   :|::|:.: |..||.:.
  Rat     1 MANQLTEEQIAEFKEAFSLFDKDGDGCITTQELGTVMRSLGQNPTEAELQDMVNEIDKDGNGTVD 65

  Fly    61 FADFLDIMHQHSKVESLPDEVIAAFKAADPQNKGTISARQLRNLLQNWGEGLSMREVDNIFREAN 125
            |.:||.:|.:..|.....:|:..||:..|....|.:||.:||:::...||.||..|||.:.:.|:
  Rat    66 FPEFLTMMSRKMKDTDSEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIQAAD 130

  Fly   126 VNNNSTVRYADFV 138
            .:.:..|.|.:||
  Rat   131 TDGDGQVNYEEFV 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17272NP_650917.1 PTZ00184 1..143 CDD:185504 51/143 (36%)
Calml3NP_001012054.1 PTZ00184 1..149 CDD:185504 51/143 (36%)

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