DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17272 and Tnnc1

DIOPT Version :10

Sequence 1:NP_650917.1 Gene:CG17272 / 42465 FlyBaseID:FBgn0038830 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_033419.1 Gene:Tnnc1 / 21924 MGIID:98779 Length:161 Species:Mus musculus


Alignment Length:143 Identity:39/143 - (27%)
Similarity:77/143 - (53%) Gaps:11/143 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EQDIDEFRECFYLF---ARSGQINNLDELTVIMRSLGLSPT---IQELVSYLKQK-NGKMSFADF 64
            |:..:||:..|.:|   |..|.|:. .||..:||.||.:||   :||::..:.:. :|.:.|.:|
Mouse    14 EEQKNEFKAAFDIFVLGAEDGCIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77

  Fly    65 LDIMHQHSKVES---LPDEVIAAFKAADPQNKGTISARQLRNLLQNWGEGLSMREVDNIFREANV 126
            |.:|.:..|.:|   ..:|:...|:..|....|.|...:|:.:||..||.::..:::.:.::.:.
Mouse    78 LVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKMMLQATGETITEDDIEELMKDGDK 142

  Fly   127 NNNSTVRYADFVK 139
            ||:..:.|.:|::
Mouse   143 NNDGRIDYDEFLE 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17272NP_650917.1 PTZ00184 1..143 CDD:185504 39/143 (27%)
Tnnc1NP_033419.1 PTZ00184 9..157 CDD:185504 39/143 (27%)

Return to query results.
Submit another query.