DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17272 and mlc-1

DIOPT Version :10

Sequence 1:NP_650917.1 Gene:CG17272 / 42465 FlyBaseID:FBgn0038830 Length:149 Species:Drosophila melanogaster
Sequence 2:NP_510829.2 Gene:mlc-1 / 181776 WormBaseID:WBGene00003369 Length:170 Species:Caenorhabditis elegans


Alignment Length:149 Identity:37/149 - (24%)
Similarity:63/149 - (42%) Gaps:4/149 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ARYFKEQDIDEFRECFYLF--ARSGQINNLDELTVIMRSLGLSPTIQELVSYLKQKNGKMSFADF 64
            |..|.::.|.||:|.|.:.  .:.|.|:..| |..:..|:|......::.:.:|:.:|.::|..|
 Worm    18 AAQFDQKTIQEFKEAFGIMDQNKDGIIDKSD-LKDLYASMGQIAPDSQIDAMIKEASGPINFTVF 81

  Fly    65 LDIMHQHSKVESLPDEVIAAFKAADPQNKGTISARQLRNLLQN-WGEGLSMREVDNIFREANVNN 128
            |.:..:..........:|.||...|.::.|.|....|..:||| .||.|...||..:::......
 Worm    82 LTLFGERLTGTDPEATIIGAFAMFDKKDCGKIKEDDLIKILQNKRGEPLDEDEVKAMYKGKPPIE 146

  Fly   129 NSTVRYADFVKIACAPVPD 147
            ...|.|..|..:......|
 Worm   147 GGEVDYKAFAHLITTGAQD 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17272NP_650917.1 PTZ00184 1..143 CDD:185504 36/143 (25%)
mlc-1NP_510829.2 PTZ00184 18..160 CDD:185504 36/142 (25%)

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