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Protein Alignment RpS20 and rbm6
DIOPT Version :9
Sequence 1: | NP_524421.1 |
Gene: | RpS20 / 42464 |
FlyBaseID: | FBgn0019936 |
Length: | 120 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_012819996.2 |
Gene: | rbm6 / 448685 |
XenbaseID: | XB-GENE-493947 |
Length: | 130 |
Species: | Xenopus tropicalis |
Alignment Length: | 88 |
Identity: | 77/88 - (87%) |
Similarity: | 83/88 - (94%) |
Gaps: | 0/88 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 33 SLENVCRDLINGAKNQNLRVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPS 97
||..||.|||.|||.:||:||||||||||||||||||||||||||||||||||||||:|||||||
Frog 42 SLFAVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPS 106
Fly 98 EIVKKITSINIEPGVEVEVTIAN 120
||||:||||:||||||||||||:
Frog 107 EIVKQITSISIEPGVEVEVTIAD 129
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
155 |
1.000 |
Domainoid score |
I4198 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
1 |
1.000 |
- |
- |
|
H37417 |
Inparanoid |
1 |
1.050 |
158 |
1.000 |
Inparanoid score |
I4172 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1454256at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001389 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto105280 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R1236 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X970 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
8 | 8.090 |
|
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