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Protein Alignment RpS20 and rps-20
DIOPT Version :9
Sequence 1: | NP_524421.1 |
Gene: | RpS20 / 42464 |
FlyBaseID: | FBgn0019936 |
Length: | 120 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_740944.1 |
Gene: | rps-20 / 173309 |
WormBaseID: | WBGene00004489 |
Length: | 117 |
Species: | Caenorhabditis elegans |
Alignment Length: | 120 |
Identity: | 83/120 - (69%) |
Similarity: | 105/120 - (87%) |
Gaps: | 3/120 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MAAAPKDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
||.|.|: ||. :.|: |.||||:||||:||:.||.||..||:||||::|.||||:|||||.|||
Worm 1 MAVAFKN-EKA-ITDN-SEHRIRLTLTSQNVKPLEKVCAQLIDGAKNEHLIVKGPIRMPTKVLRI 62
Fly 66 TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120
||||||||||||||||||||||||:|:||:|:|::::||||:|||||::|||.|:
Worm 63 TTRKTPCGEGSKTWDRFQMRIHKRLINLHAPAEVLRQITSISIEPGVDIEVTRAD 117
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C160161295 |
Domainoid |
1 |
1.000 |
158 |
1.000 |
Domainoid score |
I2517 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG0051 |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
1 |
1.000 |
- |
- |
|
H37417 |
Inparanoid |
1 |
1.050 |
166 |
1.000 |
Inparanoid score |
I2800 |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG60602 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1454256at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001389 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto19271 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_100367 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR11700 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R1236 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X970 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
15 | 14.840 |
|
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