DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17271 and cgref1

DIOPT Version :10

Sequence 1:NP_650916.1 Gene:CG17271 / 42463 FlyBaseID:FBgn0038829 Length:281 Species:Drosophila melanogaster
Sequence 2:XP_017207316.3 Gene:cgref1 / 559576 ZFINID:ZDB-GENE-131121-137 Length:259 Species:Danio rerio


Alignment Length:209 Identity:46/209 - (22%)
Similarity:76/209 - (36%) Gaps:85/209 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 GNIQQERAHIQEHMQVPIDTSKMS------EAELQFHYFKMHDSDNNNKLDGCELIKSL---IHW 197
            |:.:..|..:|.:::..:...:.|      |.|: |..|.::|.|.:.::||.||::.|   :.:
Zfish    61 GSSEDNRRLLQSYIKSNLKEGQTSPELNTREQEV-FFLFSLYDYDRSGQMDGLELMQLLTDFLTY 124

  Fly   198 HEQGSKEQPNGEKPHVEEKVFSDEELVALIDPILQMDDTSRDGYIDYPEFI-------------- 248
            ||...|               |.:.:|.|:|.:||..|.::||.:...|.:              
Zfish   125 HEMAPK---------------STDSVVTLVDYLLQTQDLNQDGLLAPSELLSPSTMEHQDNIPTD 174

  Fly   249 ---------------------KAQQKAA--------------------EKQQQQQQQQQQPHEQQ 272
                                 |..||.|                    ||.::||.|||.|.||:
Zfish   175 PPADETSKQEETGKKPENGDAKNHQKDAEVDQGSEHKNETDEEHKQTPEKAEEQQDQQQPPIEQK 239

  Fly   273 QQQQQQ-----PVH 281
            .|...|     |:|
Zfish   240 LQDDHQELENMPIH 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17271NP_650916.1 EF-hand_7 174..250 CDD:463900 21/113 (19%)
cgref1XP_017207316.3 None

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