DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17271 and Mcfd2

DIOPT Version :10

Sequence 1:NP_650916.1 Gene:CG17271 / 42463 FlyBaseID:FBgn0038829 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_640346.2 Gene:Mcfd2 / 246117 RGDID:628690 Length:145 Species:Rattus norvegicus


Alignment Length:131 Identity:53/131 - (40%)
Similarity:78/131 - (59%) Gaps:16/131 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 QQAGGHHHGQPQQVLNTGNIQQERAHIQEHMQVPID--TSKMSEAELQFHYFKMHDSDNNNKLDG 187
            :...|.|:|......:|.:.|:   ||.||::..|:  .::||..|||.|||||||.|.|:.|||
  Rat    28 EHGAGVHYGSVGLDKSTVHDQE---HIMEHLEGVINQPEAEMSPQELQLHYFKMHDYDGNSLLDG 89

  Fly   188 CELIKSLIHWH-EQGSKEQPNGEKPHVEEKVFSDEELVALIDPILQMDDTSRDGYIDYPEFIKAQ 251
            .||..::.|.| |:||::.|          ..|::||:::||.:|:.||.:.||||||.||.|:.
  Rat    90 LELSTAITHVHKEEGSEQVP----------PMSEDELISIIDGVLRDDDKNNDGYIDYAEFAKSL 144

  Fly   252 Q 252
            |
  Rat   145 Q 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17271NP_650916.1 EF-hand_7 174..250 CDD:463900 34/76 (45%)
Mcfd2NP_640346.2 EFh 76..142 CDD:238008 34/75 (45%)

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