DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17271 and CGREF1

DIOPT Version :10

Sequence 1:NP_650916.1 Gene:CG17271 / 42463 FlyBaseID:FBgn0038829 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_006560.3 Gene:CGREF1 / 10669 HGNCID:16962 Length:318 Species:Homo sapiens


Alignment Length:222 Identity:44/222 - (19%)
Similarity:76/222 - (34%) Gaps:67/222 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 VPVQQQAPVQYQQVPVQQQQQQHQPIHQQPTMQQQQQPQQGHHQQAGGHHHGQPQQVLNTGNIQQ 146
            :|..|.||......|..:.|.|..|...||. |:|....|.:.:..|                  
Human    14 LPTGQAAPKDGVTRPDSEVQHQLLPNPFQPG-QEQLGLLQSYLKGLG------------------ 59

  Fly   147 ERAHIQ-EHMQVPIDTSKMSEAELQFHYFKMHDSDNNNKLDGCELIKSLIHWHEQGSKEQPNGEK 210
             |..:| ||         :|..::..:.|.:||.|.:.:|||.||:..|......|:...|    
Human    60 -RTEVQLEH---------LSREQVLLYLFALHDYDQSGQLDGLELLSMLTAALAPGAANSP---- 110

  Fly   211 PHVEEKVFSDEELVALIDPILQMDDTSRDGYIDYPEFIK-------------------------A 250
                    :...::.::|.:|:..|.:.||.:...|.|.                         .
Human   111 --------TTNPVILIVDKVLETQDLNGDGLMTPAELINFPGVALRHVEPGEPLAPSPQEPQAVG 167

  Fly   251 QQKAAEKQQQQQQQQQQPHEQQQQQQQ 277
            :|....|...:|:.|:.|..:::.:.|
Human   168 RQSLLAKSPLRQETQEAPGPREEAKGQ 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17271NP_650916.1 EF-hand_7 174..250 CDD:463900 19/100 (19%)
CGREF1NP_006560.3 EF-hand_7 71..135 CDD:463900 17/75 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 177..318 4/18 (22%)
2A1904 <180..>309 CDD:273344 3/15 (20%)
4 X 17 AA approximate tandem repeats of P-G-P-R-G-E-A-G-G-Q-A-E-A-[KR]-G-D-A. /evidence=ECO:0000303|PubMed:8968090 219..286
Blue background indicates that the domain is not in the aligned region.

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