DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17270 and Erg28

DIOPT Version :9

Sequence 1:NP_001262785.1 Gene:CG17270 / 42462 FlyBaseID:FBgn0038828 Length:169 Species:Drosophila melanogaster
Sequence 2:NP_001100219.1 Gene:Erg28 / 299207 RGDID:1310769 Length:140 Species:Rattus norvegicus


Alignment Length:129 Identity:29/129 - (22%)
Similarity:56/129 - (43%) Gaps:18/129 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RLLYAFRGWIAFVAFMDLGTAFRSYIERRSFLGDHSDTQFIEGDYT---------ISRIIGMYCL 68
            |.|...|.|:..|:.:.:|...:|:       .||  |...|..||         .:|..|::.|
  Rat     3 RFLNVLRSWLVMVSIIAMGNTLQSF-------RDH--TFLYEKLYTGKPNLVNGLQARTFGIWTL 58

  Fly    69 LKAIALVHCTLYIHYKPVVSMGGCSLALTMVFYATEALYFRSSTINFYVIFPCVLNSITLLGLI 132
            |.::....|.:.||.|.:..:...:..|.:..:.:|...|.::.....|:.|.::.|.::||::
  Rat    59 LSSVIRCLCAIDIHNKTLYHITLWTFLLALGHFLSELFVFGTAAPTVGVLAPLMVASFSILGML 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17270NP_001262785.1 Erg28 16..125 CDD:397654 24/117 (21%)
Erg28NP_001100219.1 Erg28 8..115 CDD:397654 24/115 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3455
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1590576at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15451
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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