DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17270 and Erg28

DIOPT Version :10

Sequence 1:NP_650915.1 Gene:CG17270 / 42462 FlyBaseID:FBgn0038828 Length:169 Species:Drosophila melanogaster
Sequence 2:XP_063117824.1 Gene:Erg28 / 299207 RGDID:1310769 Length:143 Species:Rattus norvegicus


Alignment Length:122 Identity:27/122 - (22%)
Similarity:50/122 - (40%) Gaps:18/122 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RLLYAFRGWIAFVAFMDLGTAFRSYIERRSFLGDHSDTQFIEGDYT---------ISRIIGMYCL 68
            |.|...|.|:..|:.:.:|...:|:       .||  |...|..||         .:|..|::.|
  Rat     3 RFLNVLRSWLVMVSIIAMGNTLQSF-------RDH--TFLYEKLYTGKPNLVNGLQARTFGIWTL 58

  Fly    69 LKAIALVHCTLYIHYKPVVSMGGCSLALTMVFYATEALYFRSSTINFYVIFPCVLNS 125
            |.::....|.:.||.|.:..:...:..|.:..:.:|...|.::.....|:.|.::.|
  Rat    59 LSSVIRCLCAIDIHNKTLYHITLWTFLLALGHFLSELFVFGTAAPTVGVLAPLMVAS 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17270NP_650915.1 Erg28 18..129 CDD:461015 25/117 (21%)
Erg28XP_063117824.1 None

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