Sequence 1: | NP_001262777.1 | Gene: | Syp / 42460 | FlyBaseID: | FBgn0038826 | Length: | 761 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005269298.1 | Gene: | SART3 / 9733 | HGNCID: | 16860 | Length: | 981 | Species: | Homo sapiens |
Alignment Length: | 567 | Identity: | 113/567 - (19%) |
---|---|---|---|
Similarity: | 189/567 - (33%) | Gaps: | 200/567 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 38 PSCSKM---AEGNGELLDDINQKADDRGDGERTEDYPKLLEYGLDKKVAGKLDEIYKTGKLAHAE 99
Fly 100 LD------ERALDALKEFP------------VDGAL---NVLGQFLESNLEHV-------SNKSA 136
Fly 137 YLCGVMK---TYRQKSRASQQGVAAPATVKGP-----DED-----------------KIKKILER 176
Fly 177 TGYTLDVTTGQRKYGGP----------PP--------HWEGNVP-------GNGCEVFCGKIPKD 216
Fly 217 MYEDE--LIPLFENCGIIWDLRLMMDPMTGTNRGYAFVTFTNREAAVNAVRQLNDFEIRTGKKIG 279
Fly 280 VTISFNNHRLFVGNIPKNRDRDELIEEFSKHAPGLYEVIIYSSP-DDKKKNRGFCFLEYESHKAA 343
Fly 344 SLAKRRLGTGRIKVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKV 408
Fly 409 E-------RVKKIKDYAFIHFEDRDSAVEAMRGLNGKEIGASNIEVSLAKPPSDK-KKKEEILRA 465
Fly 466 RERRMMQMMQARPGIVGFETLSPYRNLSPTHPSIMSLTPMRPGARMP 512 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Syp | NP_001262777.1 | RRM1_hnRNPR_like | 205..283 | CDD:240695 | 22/79 (28%) |
RRM2_hnRNPR_like | 286..367 | CDD:240696 | 13/81 (16%) | ||
RRM3_hnRNPR_like | 381..452 | CDD:240697 | 17/77 (22%) | ||
SART3 | XP_005269298.1 | RNA14 | 100..>478 | CDD:227438 | |
NRDE-2 | 351..>504 | CDD:285605 | 5/15 (33%) | ||
RRM | 654..876 | CDD:223796 | 56/307 (18%) | ||
RRM1_SART3 | 723..796 | CDD:240837 | 25/116 (22%) | ||
RRM2_SART3 | 817..897 | CDD:240838 | 18/113 (16%) | ||
LSM_int_assoc | 895..951 | CDD:293211 | 16/63 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |