DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Syp and AT5G28390

DIOPT Version :9

Sequence 1:	NP_001262777.1	Gene:	Syp / 42460	FlyBaseID:	FBgn0038826	Length:	761	Species:	Drosophila melanogaster
Sequence 2:	NP_198191.2	Gene:	AT5G28390 / 832924	AraportID:	AT5G28390	Length:	180	Species:	Arabidopsis thaliana

Alignment Length:	202	Identity:	49/202 - (24%)
Similarity:	84/202 - (41%)	Gaps:	56/202 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly   364 VDWADPQEEPD-EQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVERV--------KKIKDYAF 419
            |.||:.:...: :.:.|:||.||::||.:|:::::||..||.:||:.:|        |:...|.|
plant    15 VSWAESRSGGEGDSSASQVKALYIKNLPRDITQERLKALFEHHGKILKVVIPPAKPGKEDSRYGF 79

  Fly   420 IHFEDRDSAVEAMRGLNGKEIGASNIEVSLAKPPSDKKKKEEILRARERRMMQMMQARPGIVGFE 484
            :|:.:|.|.:.|::.....||.||    :.::|                    :|.|.....|..
plant    80 VHYAERTSVMRALKNTERYEIDAS----AYSQP--------------------LMHAGGHAAGGM 120

  Fly   485 TLSPYRNLSPTHPSIMSLTP--------MRPG-ARMPLRTPIPREYDYFYDFFGFSDYRQGGSFG 540
            ::.|.            :.|        .:|| |.||  .|.||....:....|.|..:|....|
plant   121 SMMPI------------MLPDGRIRYVLQQPGLAAMP--QPPPRPSPPYRGGSGSSSSKQSSDNG 171

  Fly   541 NNVSYYD 547
            ...|.|:
plant   172 RGRSRYN 178

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Syp	NP_001262777.1	RRM1_hnRNPR_like	205..283	CDD:240695
		RRM2_hnRNPR_like	286..367	CDD:240696	1/2 (50%)
		RRM3_hnRNPR_like	381..452	CDD:240697	25/78 (32%)
AT5G28390	NP_198191.2	RRM	<15..>101	CDD:223796	26/85 (31%)
AT5G28390	NP_198191.2	RRM_SF	33..103	CDD:302621	23/69 (33%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0117
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810