Protein Alignment Syp and AT3G52660

DIOPT Version :9

• Sequence 1: NP_001262777.1
• Gene: Syp / 42460
• FlyBaseID: FBgn0038826
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001030849.1
• Gene: AT3G52660 / 824432
• AraportID: AT3G52660
• Length: 471
• Species: Arabidopsis thaliana
• Alignment Length: 514
• Identity: 128/514 - (24%)
• Similarity: 224/514 - (43%)
• Gaps: 102/514 - (19%)

  Fly    96 AHAELD-ERALDALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRASQQGVAAP 159
            ||..:: |..:|      :||. |...:.||..:|:...:...:..:.:...::....::.....
plant    11 AHDSMESEERVD------LDGD-NDPEEILEEEVEYEEVEEEEIEEIEEEIEEEVEVEEEEEEED 68

  Fly   160 ATVKGPDEDKIKKILERTGYTLDVTTGQRKYGGPPPHWEGNVPGNGCEVFCGKIPKDMYEDELIP 224
            |.....:|:| |:.:|....              |||        |.||:.|.||.|..|.:|..
plant    69 AVATEEEEEK-KRHVELLAL--------------PPH--------GSEVYLGGIPTDATEGDLKG 110

  Fly   225 LFENCGIIWDLRLMMDPMTGTNRGYAFVTFTNREAAVNAVRQLNDFEIRTGKKIGVTISFNNHRL 289
            ...:.|.:.::|:|.:..:|..:|||||||.:::.|..|:..||:.:.| ||:|..:.:...|||
plant   111 FCGSIGEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFR-GKRIKCSTTQAKHRL 174

  Fly   290 FVGNIPKNRDRDELIEEFSKHAPGLYEVIIYSSPDDKKKNRGFCFLEYESHKAASLAKRRLGTGR 354
            |:||:|:|....::.:..::..||:..|.:...|.:..:||||.|:||.:|..|..:|:::....
plant   175 FLGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACAEYSKQKMSNPS 239

  Fly   355 IKVWGCDIIVDWADPQE-EPDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVERV------- 411
            .|:......|.||:.:. ...:.:.|:||.||::||.:|:::::||..||.:||:.:|
plant   240 FKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALFEHHGKILKVVIPPAKP 304

  Fly   412 -KKIKDYAFIHFEDRDSAVEAMRGLNGKEIGASNIEVSLAKPPSDKKKKEEILRARERRMMQMMQ 475
             |:...|.|:|:.:|.|.:.|::.....||....::.:||||.:|:|.....::..::..:|
plant   305 GKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQADQKTNTNTVQNVQKSQLQ--- 366

  Fly   476 ARPGIVGFETLSPYRNLSPTHPSIMS--LTPMRPGARMPLRTPIPREYDYFYDFFGFSDYRQ--- 535
                              |.:|.::|  :.|...||               ...||.|.|.|
plant   367 ------------------PNYPPLLSYGMAPSPFGA---------------LGGFGASAYSQPLM 398

  Fly   536 --GGSFGNNVSYYDDMYRWIDGDYNY----------------YDYPNGGGGGSGGGGGS 576
              ||.....:|....|..  ||...|                :..|..||.||....||
plant   399 HAGGHAAGGMSMMPIMLP--DGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGS 455

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Syp	NP_001262777.1	RRM1_hnRNPR_like	205..283	CDD:240695	28/77 (36%)
		RRM2_hnRNPR_like	286..367	CDD:240696	24/80 (30%)
		RRM3_hnRNPR_like	381..452	CDD:240697	25/78 (32%)
AT3G52660	NP_001030849.1	RRM	94..165	CDD:214636	26/71 (37%)
		RRM_SF	171..252	CDD:302621	24/80 (30%)
		RRM_SF	267..346	CDD:302621	25/78 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	46	1.000	Domainoid score	I4599
eggNOG	1	0.900	-	-		E1_KOG0117
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1384330at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm3376
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X331
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	7	6.820