Protein Alignment Syp and PSRP2

DIOPT Version :9

• Sequence 1: NP_001262777.1
• Gene: Syp / 42460
• FlyBaseID: FBgn0038826
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001030841.1
• Gene: PSRP2 / 824379
• AraportID: AT3G52150
• Length: 253
• Species: Arabidopsis thaliana
• Alignment Length: 251
• Identity: 56/251 - (22%)
• Similarity: 87/251 - (34%)
• Gaps: 83/251 - (33%)

  Fly   208 VFCGKIPKDMYEDELIPLFENCGIIWDLRLMMDPMTGTNRGYAFVTFTNREAAVNAVRQLNDFEI 272
            |:.|.||:.:..::|..|.|..|.:..:::|.|..:|.:|.:.|.|..:.|.|...|.:||...:
plant    78 VYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTV 142

  Fly   273 RTGKKIGVTISFNNHRLFVGNIPKNRDRDELIEEFSKHAPGLYEVIIYSSPDDKKKNRGFCFLEY 337
            . |::|.|.|:                                |..|.||||       ...|:.
plant   143 E-GREIKVNIT--------------------------------EKPIASSPD-------LSVLQS 167

  Fly   338 ESHKAASLAKRRLGTGRIKVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDVSEDKLKEQF 402
            |.                     ...||             |..|| ||.||.:.|:::.|:..|
plant   168 ED---------------------SAFVD-------------SPYKV-YVGNLAKTVTKEMLENLF 197

  Fly   403 EQYGKVERVK--------KIKDYAFIHFEDRDSAVEAMRGLNGKEIGASNIEVSLA 450
            .:.|||...|        |...:.|:.|...:....|:..||...:....|.|:.|
plant   198 SEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSLLEGQKIRVNKA 253

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Syp	NP_001262777.1	RRM1_hnRNPR_like	205..283	CDD:240695	22/74 (30%)
		RRM2_hnRNPR_like	286..367	CDD:240696	10/80 (13%)
		RRM3_hnRNPR_like	381..452	CDD:240697	22/78 (28%)
PSRP2	NP_001030841.1	RRM_SF	77..154	CDD:327398	23/108 (21%)
		RRM	<78..>253	CDD:330708	55/249 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1384330at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920