Protein Alignment Syp and rbm46

DIOPT Version :10

• Sequence 1: NP_001262777.1
• Gene: Syp / 42460
• FlyBaseID: FBgn0038826
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: NP_001073493.2
• Gene: rbm46 / 566042
• ZFINID: ZDB-GENE-061013-298
• Length: 523
• Species: Danio rerio
• Alignment Length: 315
• Identity: 162/315 - (51%)
• Similarity: 221/315 - (70%)
• Gaps: 11/315 - (3%)

  Fly   150 RASQQGVAAPATVKGPDEDK---IKKILERTGYTLDVTTGQRKYGGPPPHWEGNVPGNGCEVFCG 211
            |:||     |:.....|..|   :..:::||||::....||||:|||||.|||..|..|.|||.|
Zfish     4 RSSQ-----PSDNSRMDSSKEAALLALMDRTGYSMVQENGQRKFGGPPPGWEGPPPPRGREVFVG 63

  Fly   212 KIPKDMYEDELIPLFENCGIIWDLRLMMDPMTGTNRGYAFVTFTNREAAVNAVRQLNDFEIRTGK 276
            |||:|||||||:|:||..|.|::.||||: .:|.|||||||.:|.||.|..|::.|:::|||.||
Zfish    64 KIPRDMYEDELVPVFEQAGHIYEFRLMME-FSGENRGYAFVMYTTREKAQRAIQLLDNYEIRPGK 127

  Fly   277 KIGVTISFNNHRLFVGNIPKNRDRDELIEEFSKHAPGLYEVIIYSSPDDKKKNRGFCFLEYESHK 341
            .|||.:|.:|.|||:|:|||::.::|:.||..|...|:.:||:|.|..|:.|||||.|:||||||
Zfish   128 FIGVCVSLDNCRLFIGSIPKDKKKEEIQEEMMKVTEGVMDVIVYPSAVDRMKNRGFAFVEYESHK 192

  Fly   342 AASLAKRRLGTGRIKVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQY- 405
            ||::|:|:|..|..::||..|.||||:|::|.||:||.:|:|||||||....:|:.|:.:|.|.
Zfish   193 AAAMARRKLIPGTFQLWGHTIQVDWAEPEKELDEETMQRVRVLYVRNLMLSTTEETLRSEFSQLK 257

  Fly   406 -GKVERVKKIKDYAFIHFEDRDSAVEAMRGLNGKEIGASNIEVSLAKPPSDKKKK 459
             |.||||||:.|||||||.:|:.|:.|:..:|||.|..|.|||:||||.|....|
Zfish   258 PGSVERVKKLTDYAFIHFYNREDALTALESMNGKVIDGSPIEVTLAKPASKDGNK 312

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Syp	NP_001262777.1	NURR_Syncrip-like	68..150	CDD:410953	162/315 (51%)
		hnRNP-R-Q	153..>563	CDD:273732	160/312 (51%)
rbm46	NP_001073493.2	hnRNP-R-Q	18..431	CDD:273732	157/296 (53%)