DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Syp and Rbp4

DIOPT Version :9

Sequence 1:	NP_001262777.1	Gene:	Syp / 42460	FlyBaseID:	FBgn0038826	Length:	761	Species:	Drosophila melanogaster
Sequence 2:	NP_476935.1	Gene:	Rbp4 / 41668	FlyBaseID:	FBgn0010258	Length:	428	Species:	Drosophila melanogaster

Alignment Length:	209	Identity:	45/209 - (21%)
Similarity:	86/209 - (41%)	Gaps:	38/209 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly   207 EVFCGKIPKDMYEDELIPLFENCGIIWDLRLMMDPMTGTNRGYAFVTFTNREAA----------- 260
            ::|.|.:......:.|...|...||:.|..::.||::..:||:.|||:.:.::.
  Fly    33 KIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRARPHTI 97

  Fly   261 ----VNAVRQLNDFEIRTGKKIGVTI-SF-------NNHRLFVGNIPKNRDRDELIEEFSKHAPG 313
                |.....|...:.:.|..:|..: ||       |:.|:|:|.:.:..|.:.:.|.||:..|.
  Fly    98 DNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDENIVREYFSQFGPV 162

  Fly   314 LYEVIIYSSPDDKKKNRGFCFLEYESHKAA--SLAKRRLGTGRIKVWGCDIIVDWADPQEEPDEQ 376
            ....::...  :..:.|.|.|||:....:|  :||.|       |.|....:|:.....::.|.:
  Fly   163 ASVKLLMDR--ETGRQRAFGFLEFVDPSSAEKALAPR-------KHWILQTLVEVKRSTQKADRR 218

  Fly   377 ----TMSKVKVLYV 386
                ..|.|:..|:
  Fly   219 FRFPIFSSVRAGYI 232

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Syp	NP_001262777.1	RRM1_hnRNPR_like	205..283	CDD:240695	18/91 (20%)
		RRM2_hnRNPR_like	286..367	CDD:240696	20/82 (24%)
		RRM3_hnRNPR_like	381..452	CDD:240697	2/6 (33%)
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	16/76 (21%)
Rbp4	NP_476935.1	RRM2_hnRNPA_like	137..209	CDD:240774	20/80 (25%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45464016
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840