DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Syp and CG2931

DIOPT Version :9

Sequence 1:	NP_001262777.1	Gene:	Syp / 42460	FlyBaseID:	FBgn0038826	Length:	761	Species:	Drosophila melanogaster
Sequence 2:	NP_649552.1	Gene:	CG2931 / 40673	FlyBaseID:	FBgn0037342	Length:	302	Species:	Drosophila melanogaster

Alignment Length:	182	Identity:	36/182 - (19%)
Similarity:	81/182 - (44%)	Gaps:	39/182 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly   303 LIEEFSKHAPGLYEVIIYSSPDDKKKNRGFCFLEYESHKAASLAKRRLGTGRIKVWGCDIIVDWA 367
            :.||..|.|.....:..:.:.:.|||:|          |...:|.   ||    ||....:.||
  Fly   147 IAEEAIKAARASSALQSFQTTERKKKDR----------KTVRIAG---GT----VWEDTSLADW- 193

  Fly   368 DPQEEPDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVERVKKIKD--------YAFIHFED 424
                 ||:...     ::..:|..||:::.|...|.::...:|.:.::|        :.|:.|.:
  Fly   194 -----PDDDFR-----IFCGDLGNDVNDEVLTRTFNKFPSFQRARVVRDKRTGKSKGFGFVSFRE 248

  Fly   425 RDSAVEAMRGLNGKEIGASNIEVSLAKPPSDKKKKEEILRARERRMMQMMQA 476
            ....:.||:.::|:.:|:..|::   :..:.:::..::::.:||....::||
  Fly   249 PADFIRAMKEMDGRYVGSRPIKL---RKSTWRQRSLDVVKKKEREKQVLLQA 297

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Syp	NP_001262777.1	RRM1_hnRNPR_like	205..283	CDD:240695
		RRM2_hnRNPR_like	286..367	CDD:240696	15/63 (24%)
		RRM3_hnRNPR_like	381..452	CDD:240697	14/78 (18%)
CG2931	NP_649552.1	RRM_RBM42	192..274	CDD:240829	18/95 (19%)
CG2931	NP_649552.1	RRM	<194..>280	CDD:223796	16/93 (17%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45464018
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840