Sequence 1: | NP_001262777.1 | Gene: | Syp / 42460 | FlyBaseID: | FBgn0038826 | Length: | 761 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001097631.1 | Gene: | Rbp6 / 39919 | FlyBaseID: | FBgn0260943 | Length: | 499 | Species: | Drosophila melanogaster |
Alignment Length: | 560 | Identity: | 109/560 - (19%) |
---|---|---|---|
Similarity: | 181/560 - (32%) | Gaps: | 198/560 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 201 VPGNGCEVFCGKIPKDMYEDELIPLFENCGIIWDLRLMMDPMTGTNRGYAFVTFTNREAAVNAVR 265
Fly 266 QLNDFEIRTGKKIGVTISF----------NNHRLFVGNIPKNRDRDELIEEFSKHAPGLYEVIIY 320
Fly 321 SSPDDKKKN--RGFCFLEYESHKAASLAKRRLGTGRIKVWGCDI--------IVDW--ADPQEEP 373
Fly 374 DEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDRDSAVEAMRGLNGK 438
Fly 439 EIGASNIEVSLAKPPSDKKKKEEILRARERRMMQMMQARPGIVGFETLSPYRNLSPTHPSIMSLT 503
Fly 504 PMRPGARMPLRTPIPREYDYFYDFFGFSDYRQGGSFGNNVSYYDDMYRWIDGDYNYYDYPNGGGG 568
Fly 569 GSGGGGGSVSGGTVLP--LSAGG--------------------------------SQNSPMASGQ 599
Fly 600 RSARGSASG--------PSASPSLMGVGRG-------HGITVPRGRVVGQRGSI------SRLGA 643
Fly 644 QTVPQAAGAAAAAGQAAAAVA---QRGATGQGAPAATGGF 680 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Syp | NP_001262777.1 | RRM1_hnRNPR_like | 205..283 | CDD:240695 | 22/77 (29%) |
RRM2_hnRNPR_like | 286..367 | CDD:240696 | 18/92 (20%) | ||
RRM3_hnRNPR_like | 381..452 | CDD:240697 | 12/70 (17%) | ||
Rbp6 | NP_001097631.1 | RRM1_MSI | 31..105 | CDD:241020 | 22/75 (29%) |
RRM2_MSI | 119..192 | CDD:240769 | 18/89 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45463985 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |