Sequence 1: | NP_001262777.1 | Gene: | Syp / 42460 | FlyBaseID: | FBgn0038826 | Length: | 761 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608837.2 | Gene: | Secp43 / 33652 | FlyBaseID: | FBgn0031607 | Length: | 336 | Species: | Drosophila melanogaster |
Alignment Length: | 269 | Identity: | 57/269 - (21%) |
---|---|---|---|
Similarity: | 91/269 - (33%) | Gaps: | 101/269 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 206 CEVFCGKIPKDMYEDELIPLFENCGIIWD---LRLMMDPMTGTNRGYAFVTFTNREAAVNAVRQL 267
Fly 268 NDFEIRTGKKIGVTISFNNHRLFVGNIPKNRDRDELIEEFSKHAPGLYEVIIYSSPDDKKKNRGF 332
Fly 333 CFLEYESHKAASLAKRRLGTGRIKVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDVSEDK 397
Fly 398 LKEQF-EQYGKVERVKKI-------KDYAFIHFEDRDSAVEAMRGLNGK-EIGASNIEVSLAKPP 453
Fly 454 SDKKKKEEI 462 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Syp | NP_001262777.1 | RRM1_hnRNPR_like | 205..283 | CDD:240695 | 26/79 (33%) |
RRM2_hnRNPR_like | 286..367 | CDD:240696 | 8/80 (10%) | ||
RRM3_hnRNPR_like | 381..452 | CDD:240697 | 19/79 (24%) | ||
Secp43 | NP_608837.2 | RRM1_SECp43 | 7..90 | CDD:241054 | 28/93 (30%) |
RRM2_SECp43 | 99..180 | CDD:241056 | 22/137 (16%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45463927 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |