Protein Alignment Syp and Hnrnpr

DIOPT Version :10

• Sequence 1: NP_001262777.1
• Gene: Syp / 42460
• FlyBaseID: FBgn0038826
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: XP_063143920.1
• Gene: Hnrnpr / 319110
• RGDID: 631348
• Length: 635
• Species: Rattus norvegicus
• Alignment Length: 748
• Identity: 330/748 - (44%)
• Similarity: 419/748 - (56%)
• Gaps: 150/748 - (20%)

  Fly    41 SKMAEGNGELLDDINQKADDRGDGERTEDYPKLLEYGLDKKVAGKLDEIYKTGKLAHAELDERAL 105
            :....||...|.: .::..|......||.|..|:|.||.:|||.:||||::||.:|:.:|||||:
  Rat     2 ANQVNGNAVQLKE-EEEPMDTSSVTHTEHYKTLVEAGLPQKVAERLDEIFQTGLVAYVDLDERAI 65

  Fly   106 DALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRASQQGVAAPATVKGPDEDKI 170
            |||:||..:|||:||.||.||:|.||.||||:||||||||||:.:   ||.....:.|||||.||
  Rat    66 DALREFNEEGALSVLQQFKESDLSHVQNKSAFLCGVMKTYRQREK---QGSKVQESTKGPDEAKI 127

  Fly   171 KKILERTGYTLDVTTGQRKYGGPPPH--WEGNVPGNGCEVFCGKIPKDMYEDELIPLFENCGIIW 233
            |.:||||||||||||||||||||||.  :.|..||.|.|||.||||:|:|||||:||||..|.||
  Rat   128 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKAGPIW 192

  Fly   234 DLRLMMDPMTGTNRGYAFVTFTNREAAVNAVRQLNDFEIRTGKKIGVTISFNNHRLFVGNIPKNR 298
            ||||||||::|.||||||:||..:|||..||:..:.:|||.||.:||.||..|:|||||:||||:
  Rat   193 DLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNK 257

  Fly   299 DRDELIEEFSK---HAPGLYEVIIYSSPDDKKKNRGFCFLEYESHKAASLAKRRLGTGRIKVWGC 360
            .::.::|||||   ...||.:||:|..||||||||||||||||.||:|:.|:|||.:|::||||.
  Rat   258 TKENILEEFSKVTGLTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGN 322

  Fly   361 DIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDR 425
            .:.|:||||.||||.:.|:|||||:||||...|:|:.|::.|.::||:|||||:|||||:|||||
  Rat   323 VVTVEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEFGKLERVKKLKDYAFVHFEDR 387

  Fly   426 DSAVEAMRGLNGKEIGASNIEVSLAKPPSDKKKKEEILRARERRMMQMMQARPGIVGFETLSPYR 490
            .:||:||..:|||||....||:.|||||..|:|:.:..|...|.           ..:|..  |.
  Rat   388 GAAVKAMDEMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRS-----------TAYEDY--YY 439

  Fly   491 NLSPTHPSIMSLTPMR---PGARMPLRTPIPREYDYFYDFFGFSDYRQGGSFGNNVSYYDDMYRW 552
            :..|..|     .|||   .|.|        ..|.|..|::|:.|            ||||.|
  Rat   440 HPPPRMP-----PPMRGRGRGGR--------GGYGYPPDYYGYED------------YYDDYY-- 477

  Fly   553 IDGDYNYYDYPNG----------GGGGSGGGGGSVSGGTVLPLSAGGSQNSPMASGQRSARGSAS 607
               .|:|:||..|          |....|.|||                        |..||:..
  Rat   478 ---GYDYHDYRGGYEDPYYGYDDGYAVRGRGGG------------------------RGGRGAPP 515

  Fly   608 GPSASPSLMGVGRGHGITVPRGRV-VGQRGSISRLGAQTVPQAAGAAAAAGQAAAAVAQRGATGQ 671
            .|          ||.|...||||. ..|||:         |......:..|:...|..|||...:
  Rat   516 PP----------RGRGAPPPRGRAGYSQRGA---------PLGPPRGSRGGRGGPAQQQRGRGSR 561

  Fly   672 GAPAATGGFRGVLPTRPSARGTQHVKPLQNLPVVGKRKFDGGHQNPADVKRRYPSGLIGNGGSWG 736
            ||....||..|                       ||||.||  .|..|.|||..:    |..:||
  Rat   562 GARGNRGGNVG-----------------------GKRKADG--YNQPDSKRRQTN----NQQNWG 597

  Fly   737 SLPLPQQPLGTNG------------EQWYMDTF 757
            |.|:.||||...|            :::|.||:
  Rat   598 SQPIAQQPLQQGGDYSGNYGYNNDNQEFYQDTY 630

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Syp	NP_001262777.1	NURR_Syncrip-like	68..150	CDD:410953	52/81 (64%)
		hnRNP-R-Q	153..>563	CDD:273732	217/417 (52%)
Hnrnpr	XP_063143920.1	None