Sequence 1: | NP_001262777.1 | Gene: | Syp / 42460 | FlyBaseID: | FBgn0038826 | Length: | 761 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038966069.1 | Gene: | Hnrnpr / 319110 | RGDID: | 631348 | Length: | 635 | Species: | Rattus norvegicus |
Alignment Length: | 748 | Identity: | 330/748 - (44%) |
---|---|---|---|
Similarity: | 419/748 - (56%) | Gaps: | 150/748 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 41 SKMAEGNGELLDDINQKADDRGDGERTEDYPKLLEYGLDKKVAGKLDEIYKTGKLAHAELDERAL 105
Fly 106 DALKEFPVDGALNVLGQFLESNLEHVSNKSAYLCGVMKTYRQKSRASQQGVAAPATVKGPDEDKI 170
Fly 171 KKILERTGYTLDVTTGQRKYGGPPPH--WEGNVPGNGCEVFCGKIPKDMYEDELIPLFENCGIIW 233
Fly 234 DLRLMMDPMTGTNRGYAFVTFTNREAAVNAVRQLNDFEIRTGKKIGVTISFNNHRLFVGNIPKNR 298
Fly 299 DRDELIEEFSK---HAPGLYEVIIYSSPDDKKKNRGFCFLEYESHKAASLAKRRLGTGRIKVWGC 360
Fly 361 DIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDR 425
Fly 426 DSAVEAMRGLNGKEIGASNIEVSLAKPPSDKKKKEEILRARERRMMQMMQARPGIVGFETLSPYR 490
Fly 491 NLSPTHPSIMSLTPMR---PGARMPLRTPIPREYDYFYDFFGFSDYRQGGSFGNNVSYYDDMYRW 552
Fly 553 IDGDYNYYDYPNG----------GGGGSGGGGGSVSGGTVLPLSAGGSQNSPMASGQRSARGSAS 607
Fly 608 GPSASPSLMGVGRGHGITVPRGRV-VGQRGSISRLGAQTVPQAAGAAAAAGQAAAAVAQRGATGQ 671
Fly 672 GAPAATGGFRGVLPTRPSARGTQHVKPLQNLPVVGKRKFDGGHQNPADVKRRYPSGLIGNGGSWG 736
Fly 737 SLPLPQQPLGTNG------------EQWYMDTF 757 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Syp | NP_001262777.1 | RRM1_hnRNPR_like | 205..283 | CDD:240695 | 50/77 (65%) |
RRM2_hnRNPR_like | 286..367 | CDD:240696 | 49/83 (59%) | ||
RRM3_hnRNPR_like | 381..452 | CDD:240697 | 42/70 (60%) | ||
Hnrnpr | XP_038966069.1 | NURR_hnRNPR | 27..110 | CDD:410955 | 53/82 (65%) |
hnRNP-R-Q | 106..630 | CDD:273732 | 274/641 (43%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 102 | 1.000 | Domainoid score | I6680 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0117 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 549 | 1.000 | Inparanoid score | I1102 |
OMA | 1 | 1.010 | - | - | QHG49453 | |
OrthoDB | 1 | 1.010 | - | - | D1384330at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000581 | |
OrthoInspector | 1 | 1.000 | - | - | otm45375 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104511 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR21245 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X331 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.880 |