Protein Alignment Syp and Syncrip-ps2

DIOPT Version :10

• Sequence 1: NP_001262777.1
• Gene: Syp / 42460
• FlyBaseID: FBgn0038826
• Length: 761
• Species: Drosophila melanogaster
• Sequence 2: XP_063122498.1
• Gene: Syncrip-ps2 / 100910069
• RGDID: 6500498
• Length: 243
• Species: Rattus norvegicus
• Alignment Length: 364
• Identity: 105/364 - (28%)
• Similarity: 137/364 - (37%)
• Gaps: 168/364 - (46%)

  Fly   170 IKKILERTGYTLDVTTGQRKYGGPPPH--WEGNVPGNGCEVFCGKIPKDMYEDELIPLFENCGII 232
            ::.:||||||||||||||||||||||.  :.|..|..|.|:|.||||:|::||||:||||..|.|
  Rat     5 LQALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPI 69

  Fly   233 WDLRLMMDPMTGTNRGYAFVTFTNREAAVNAVRQLNDFEIRTGKKIGVTISFNNHRLFVGNIPKN 297
            |||||||||:||.|||||||||..:|||..||:
  Rat    70 WDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVK-------------------------------- 102

  Fly   298 RDRDELIEEFSKHAPGLYEVIIYSSPDDKKKNRGFCFLEYESHKAASLAKRRLGTGRIKVWGCDI 362
                                                                             
  Rat   103 ----------------------------------------------------------------- 102

  Fly   363 IVDWADPQEEPDEQTMSKVKVLYVRNLTQDVSEDKLKEQFEQYGKVERVKKIKDYAFIHFEDRDS 427
                             .||||:|.||...|:                            |:||.
  Rat   103 -----------------LVKVLFVSNLANTVT----------------------------EERDG 122

  Fly   428 AV--EAMRGLNGKEIGASNIEVSLAKPPSDKKKKEEILRARERRMMQMMQARPGIVGFETLSPY- 489
            ||  |.|..::||::...||:|..||.|..|:|:.:..|...:..:.::|..     |...:.|
  Rat   123 AVKEEIMEEMHGKDLEGENIKVVFAKSPDKKRKESKAQRQAAKNQISVLQGT-----FSGRAEYT 182

  Fly   490 -RNLSPTHPS-------------IMSLTPMRPGARMPLR 514
             :..||..||             :|:....||.  :|.|
  Rat   183 AQGWSPEQPSSSTSHAQRRQRGEVMATPSRRPS--VPTR 219

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Syp	NP_001262777.1	NURR_Syncrip-like	68..150	CDD:410953
		hnRNP-R-Q	153..>563	CDD:273732	105/364 (29%)
Syncrip-ps2	XP_063122498.1	None