DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha4T1 and PRE8

DIOPT Version :10

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_013618.1 Gene:PRE8 / 854882 SGDID:S000004557 Length:250 Species:Saccharomyces cerevisiae


Alignment Length:221 Identity:72/221 - (32%)
Similarity:126/221 - (57%) Gaps:5/221 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSRYGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKIS 65
            |:.||..:||.|||.|.|.|::||..||::|.|::|::..|.||:..||.|.|.:....|:.|:|
Yeast     1 MTDRYSFSLTTFSPSGKLGQIDYALTAVKQGVTSLGIKATNGVVIATEKKSSSPLAMSETLSKVS 65

  Fly    66 MLDRHVALAFAGLTADARILINRG-QVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPF 129
            :|...:...::|:..|.|:|:::. :|...|::..:......:.:...:|::.|:.||..|.|||
Yeast    66 LLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSGGVRPF 130

  Fly   130 GISCLIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAM 194
            |:|.||.|.|......|:..:|||.:..:||||.|:.:...:.|.||.::| |:..: |||.:|:
Yeast   131 GVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWND-ELELE-DAIHIAL 193

  Fly   195 RALLEVT--QMSQMRLEVAVLENGKP 218
            ..|.|..  :.:...:|:|::.:..|
Yeast   194 LTLKESVEGEFNGDTIELAIIGDENP 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 69/210 (33%)
PRE8NP_013618.1 proteasome_alpha_type_2 5..247 CDD:239719 70/217 (32%)

Return to query results.
Submit another query.