DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and PRE6

DIOPT Version :9

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_014604.1 Gene:PRE6 / 854119 SGDID:S000005398 Length:254 Species:Saccharomyces cerevisiae


Alignment Length:250 Identity:122/250 - (48%)
Similarity:168/250 - (67%) Gaps:3/250 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SRYGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDR-TVRKISM 66
            |.|.|||:|||||||:.|||||.|||::|:.||||:|.||||||.|:.|..::|:.| |..|:|.
Yeast     2 SGYDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSK 66

  Fly    67 LDRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGI 131
            :|.||.|:|:||.||:||||.:.:||.|||||..|:.||:||:|||:|.::|:|||..|.||||:
Yeast    67 IDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGV 131

  Fly   132 SCLIGGID-ADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHE-VTTKCDAIKLAM 194
            |.||.|.| .|...:|:.||||||:..:.|...||.:.|||||.||.|...| ..|..:.:||.:
Yeast   132 STLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTV 196

  Fly   195 RALLEVTQMSQMRLEVAVLENGKPMKMLDSVVISEIVKIVQNEKELQAKAHKMKR 249
            |:||||.|.....:|:.|::....:..|.|..|::.|..::.||:.|.:..|.|:
Yeast   197 RSLLEVVQTGAKNIEITVVKPDSDIVALSSEEINQYVTQIEQEKQEQQEQDKKKK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 PRK03996 5..239 CDD:235192 117/236 (50%)
proteasome_alpha_type_7 5..213 CDD:239724 111/210 (53%)
PRE6NP_014604.1 proteasome_alpha_type_7 4..215 CDD:239724 111/210 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345390
Domainoid 1 1.000 202 1.000 Domainoid score I553
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2086
Inparanoid 1 1.050 264 1.000 Inparanoid score I615
Isobase 1 0.950 - 0 Normalized mean entropy S208
OMA 1 1.010 - - QHG62217
OrthoFinder 1 1.000 - - FOG0002043
OrthoInspector 1 1.000 - - otm46601
orthoMCL 1 0.900 - - OOG6_101207
Panther 1 1.100 - - O PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1345
TreeFam 1 0.960 - -
1514.710

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