DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and SCL1

DIOPT Version :9

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_011504.3 Gene:SCL1 / 852873 SGDID:S000002979 Length:252 Species:Saccharomyces cerevisiae


Alignment Length:243 Identity:68/243 - (27%)
Similarity:115/243 - (47%) Gaps:12/243 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YGRALTIFSPDGHLLQVEYAQEAVRKGS-TAVGVRGANCVVLGVEKSSVSEMQEDRTVRKISMLD 68
            |.|.:|||||:|.|.|||||.:|..:.: .::.|||.:|.|:..:|....::.:..||..|..:.
Yeast    12 YDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFCIS 76

  Fly    69 RHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISC 133
            |.:.:...|...|||....|.:.|....|..:...:..:.:.:.:|.|.|.|||....||.|:..
Yeast    77 RTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVIL 141

  Fly   134 LIGGIDADGSARLFHTEPSGIFHEYKATATG----RWANTVREFFEKAYSDH---EVTTKCDAIK 191
            ....:|.:....::.|:|:|.:..|||||||    .....:...|:|:..||   |...|  .::
Yeast   142 TFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKIDHINEESWEK--VVE 204

  Fly   192 LAMRALLEV--TQMSQMRLEVAVLENGKPMKMLDSVVISEIVKIVQNE 237
            .|:..:::.  |:.|:..|||.|....|...:....:...:|.|.:.:
Yeast   205 FAITHMIDALGTEFSKNDLEVGVATKDKFFTLSAENIEERLVAIAEQD 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 PRK03996 5..239 CDD:235192 68/243 (28%)
proteasome_alpha_type_7 5..213 CDD:239724 64/217 (29%)
SCL1NP_011504.3 proteasome_alpha_type_6 12..228 CDD:239723 64/217 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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