DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and psma6l

DIOPT Version :10

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_571870.2 Gene:psma6l / 83917 ZFINID:ZDB-GENE-010502-2 Length:252 Species:Danio rerio


Alignment Length:244 Identity:73/244 - (29%)
Similarity:116/244 - (47%) Gaps:11/244 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YGRALTIFSPDGHLLQVEYAQEAV-RKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKISMLD 68
            :.|.:|||||:|.|.|||||.:|: :.|.|.||:||.:|.||..:|.....:.:..|:..:..:.
Zfish     9 FDRHITIFSPEGRLYQVEYAFKAISQSGLTTVGIRGVDCAVLVTQKKVSDTLLDASTMTNMFRIT 73

  Fly    69 RHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISC 133
            ..:.....|..||:|..::|.::|....:..|...|.::.:.|.||.|.|.|||....||.|...
Zfish    74 PRIGCVMTGHYADSRSQVHRARIEAGEWKYKFGYDVPVDALCRRLADLSQVYTQNAEMRPLGCCM 138

  Fly   134 LIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAY-----SDHEVTTKCD-AIKL 192
            ::..:|......|:..:|:|.|..::||:.|........:.||..     ...||....| ::::
Zfish   139 MLISMDPQKGPMLYKCDPAGYFCGFRATSVGVKHTEANSYLEKKIKKMQKKKEEVELDFDSSVQM 203

  Fly   193 AMRALLEVTQM--SQMRLEVAVLENGKP-MKMLDSVVIS-EIVKIVQNE 237
            |:..|..|..|  ....|||||:....| .:.|..|.|. .:|.|.:.|
Zfish   204 AISCLSSVLCMDFKCTELEVAVVTKENPKFRTLSEVEIERHLVAIAERE 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 65/216 (30%)
psma6lNP_571870.2 proteasome_alpha_type_6 8..226 CDD:239723 65/216 (30%)

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