DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and PAA1

DIOPT Version :10

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_198409.1 Gene:PAA1 / 833524 AraportID:AT5G35590 Length:246 Species:Arabidopsis thaliana


Alignment Length:217 Identity:65/217 - (29%)
Similarity:116/217 - (53%) Gaps:3/217 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YGRALTIFSPDGHLLQVEYAQEAVR-KGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKISMLD 68
            |.|.:|||||:|.|.|||||.:||: .|.|::||||.:.|.:..:|....::.:..:|..:..:.
plant     9 YDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPIT 73

  Fly    69 RHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISC 133
            :::.|...|:|||||.|:.:.:.:....|..:..::.::.:.:::|...|.|||....||.|:..
plant    74 KYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVA 138

  Fly   134 LIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALL 198
            ::.|:|.:....|:..:|:|.|:.:|||:.|........|.||...::...|..:.::.|:.||.
plant   139 MVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQ 203

  Fly   199 EVTQ--MSQMRLEVAVLENGKP 218
            .|.|  .....:||.|:....|
plant   204 SVLQEDFKATEIEVGVVRAENP 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 63/210 (30%)
PAA1NP_198409.1 proteasome_alpha_type_6 8..220 CDD:239723 63/210 (30%)

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