DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and PAA1

DIOPT Version :9

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_198409.1 Gene:PAA1 / 833524 AraportID:AT5G35590 Length:246 Species:Arabidopsis thaliana


Alignment Length:217 Identity:65/217 - (29%)
Similarity:116/217 - (53%) Gaps:3/217 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YGRALTIFSPDGHLLQVEYAQEAVR-KGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKISMLD 68
            |.|.:|||||:|.|.|||||.:||: .|.|::||||.:.|.:..:|....::.:..:|..:..:.
plant     9 YDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPIT 73

  Fly    69 RHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISC 133
            :::.|...|:|||||.|:.:.:.:....|..:..::.::.:.:::|...|.|||....||.|:..
plant    74 KYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVA 138

  Fly   134 LIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALL 198
            ::.|:|.:....|:..:|:|.|:.:|||:.|........|.||...::...|..:.::.|:.||.
plant   139 MVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQ 203

  Fly   199 EVTQ--MSQMRLEVAVLENGKP 218
            .|.|  .....:||.|:....|
plant   204 SVLQEDFKATEIEVGVVRAENP 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 PRK03996 5..239 CDD:235192 65/217 (30%)
proteasome_alpha_type_7 5..213 CDD:239724 63/210 (30%)
PAA1NP_198409.1 proteasome_alpha_type_6 8..220 CDD:239723 63/210 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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