DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and PBF1

DIOPT Version :10

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_191641.1 Gene:PBF1 / 825253 AraportID:AT3G60820 Length:223 Species:Arabidopsis thaliana


Alignment Length:209 Identity:41/209 - (19%)
Similarity:81/209 - (38%) Gaps:20/209 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GSTAVGVRGAN-CVVLGVEKSSVSEMQEDRTVRKISMLDRHVALAFAGLTADARILINRGQVECQ 94
            |.|.|.:.|:: ||:....:.|.......|...||..|.....|:.:|..||.:.|    |...:
plant    15 GGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKAL----QKVLK 75

  Fly    95 SHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISCLIGGIDADGSARLFHTEPSGIFHEYK 159
            |..|.:::|...:.....:|||...........|:....::||:|.:|...:|..:..|.:....
plant    76 SRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDAVGSYERVG 140

  Fly   160 ATATGRWANTVREFFEK-----------AYSDHEVTTKCDAIKLAMRALLEVTQ---MSQMRLEV 210
            ..|.|..:..:..|.:.           ....:...::.:|:.|........|:   .:..:||:
plant   141 YGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASATERDIYTGDKLEI 205

  Fly   211 AVLE-NGKPMKMLD 223
            .:|: :|...:::|
plant   206 MILKADGIKTELMD 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 38/196 (19%)
PBF1NP_191641.1 proteasome_beta_type_1 8..223 CDD:239726 41/209 (20%)

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