DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha4T1 and PSMB7

DIOPT Version :9

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_002790.1 Gene:PSMB7 / 5695 HGNCID:9544 Length:277 Species:Homo sapiens


Alignment Length:230 Identity:48/230 - (20%)
Similarity:91/230 - (39%) Gaps:27/230 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ALTIFSPD-----------GHLLQVEYAQEA-----VRK-GSTAVGVRGANCVVLGVEKSSVSEM 55
            |:::::|.           ..:|:.::|:..     ||| |:|..||...:.:|||.:..:...|
Human     3 AVSVYAPPVGGFSFDNCRRNAVLEADFAKRGYKLPKVRKTGTTIAGVVYKDGIVLGADTRATEGM 67

  Fly    56 -QEDRTVRKISMLDRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQK 119
             ..|:...||..:..::....||..||..:.........:.|.|:......:....|.|.|:..:
Human    68 VVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFR 132

  Fly   120 YTQCNGRRPFGISCLIGGIDADGSARLFHTEPSGIFHE--YKATATGRWANTVREFFEKAYSDHE 182
            |     :...|.:.::||:|..| ..|:...|.|...:  |....:|..| .:..|.:|...|.|
Human   133 Y-----QGYIGAALVLGGVDVTG-PHLYSIYPHGSTDKLPYVTMGSGSLA-AMAVFEDKFRPDME 190

  Fly   183 VTTKCDAIKLAMRALLEVTQMSQMRLEVAVLENGK 217
            .....:.:..|:.|.:.....|...:::.|:...|
Human   191 EEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNK 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 PRK03996 5..239 CDD:235192 48/230 (21%)
proteasome_alpha_type_7 5..213 CDD:239724 46/224 (21%)
PSMB7NP_002790.1 proteasome_beta_type_7 44..232 CDD:239732 40/189 (21%)
Pr_beta_C 236..271 CDD:403609
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.