DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4T1 and PSMB5

DIOPT Version :10

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_002788.1 Gene:PSMB5 / 5693 HGNCID:9542 Length:263 Species:Homo sapiens


Alignment Length:179 Identity:37/179 - (20%)
Similarity:79/179 - (44%) Gaps:22/179 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GSTAVGVRGANCVVLGVE-KSSVSEMQEDRTVRKISMLDRHVALAFAGLTADA----RILINRGQ 90
            |:|.:..:..:.|::..: :::.......:||:|:..::.::....||..||.    |:|..   
Human    59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLAR--- 120

  Fly    91 VECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGIS--CLIGGIDADGSARLFHTEPSG 153
             :|:.:.|..:.::::...::.||.:..:|      :..|:|  .:|.|.|..|.. |::.:..|
Human   121 -QCRIYELRNKERISVAAASKLLANMVYQY------KGMGLSMGTMICGWDKRGPG-LYYVDSEG 177

  Fly   154 IFHEYKATATGRWANTVREFFEKAYS-DHEVTTKCDAIKLAMRALLEVT 201
            ........:.|..:.......::.|| |.||.   .|..||.||:.:.|
Human   178 NRISGATFSVGSGSVYAYGVMDRGYSYDLEVE---QAYDLARRAIYQAT 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 proteasome_alpha_type_7 5..213 CDD:239724 37/179 (21%)
PSMB5NP_002788.1 proteasome_beta_type_5 60..247 CDD:239730 36/178 (20%)

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