DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha4T1 and PSMB1

DIOPT Version :9

Sequence 1:NP_650910.1 Gene:Prosalpha4T1 / 42457 FlyBaseID:FBgn0265606 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_002784.1 Gene:PSMB1 / 5689 HGNCID:9537 Length:241 Species:Homo sapiens


Alignment Length:217 Identity:38/217 - (17%)
Similarity:80/217 - (36%) Gaps:40/217 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVR-----KISMLDRHVALAFAGL 78
            ||:.:: ..|..|.|.:.:.|.:..::    :|.:.:.|..::.     |...|.....:..:|.
Human    26 LQLRFS-PYVFNGGTILAIAGEDFAIV----ASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGF 85

  Fly    79 TADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRR--PFGISCLIGGIDAD 141
            ..|...|....:...:.::.:....:|...|...|:      |....||  |:.:..:|||:|.:
Human    86 HGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLS------TILYSRRFFPYYVYNIIGGLDEE 144

  Fly   142 GSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALLEVTQMSQM 206
            |...::..:|.|.:......|.|..:..::...     |::|..|                 :..
Human   145 GKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLL-----DNQVGFK-----------------NMQ 187

  Fly   207 RLEVAVLENGKPMKMLDSVVIS 228
            .:|...|...:.|:::..|.||
Human   188 NVEHVPLSLDRAMRLVKDVFIS 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4T1NP_650910.1 PRK03996 5..239 CDD:235192 38/217 (18%)
proteasome_alpha_type_7 5..213 CDD:239724 33/200 (17%)
PSMB1NP_002784.1 proteasome_beta_type_1 30..241 CDD:239726 36/213 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.